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BaseInfo

ncRNA ID	novel_zma_miR13080
Species	Zea mays
Class	miRNA
Genome position	Chr6:30631241-30631352 [-]
Reference genome	RefGen_v4
Source	SRR5451004
Length	24
Mature sequence(if miRNA)	89 - CAGCGGACUUAGCUUGACAGGCAG - 112
Stem-loop(if miRNA)	--   C    - UA      C   CA       AGU  U       A -AA  UAUU   CAG GGAC U  GCUUGA AGG  GAGGUUC   CA UACCUUC G   UC    C   ||| |||| |  |||||| |||  |||||||   || ||||||| |   ||    C   GUU UCUG A  CGGGCU UCC  CUUCGAG   GU GUGGAAG C   AG    A UG   -    U GC      C   UC       GAC  U       A GAC  CUUC
Stem-loop sequence	CAGCGGACUUAGCUUGACAGGCAGAGGUUCAGUCAUUACCUUCAGAAUCUAUUCCACUUCGACAGCAGAAGGUGUUGCAGGAGCUUCCUCCUCUCGGGCCGAUGUCUUUGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI408829.1	ncRNA:24   GACGGACAGUUCGAUUCAGGCGAC   1   =||||||||||||||||||||||| targets:63   UUGCCUGUCAAGCUAAGUCCGCUG   86 Target Full Sequence	0.0	Sequence 6954 from Patent EP2074227	NA	coding protein	psRNATarget
JB169290.1	ncRNA:24   GACGGACAGUUCGAUUCAGGCGAC   1   =||||||||||||||||||||||| targets:63   UUGCCUGUCAAGCUAAGUCCGCUG   86 Target Full Sequence	0.0	Sequence 6954 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240959.1	ncRNA:24   GACGGACAGUUCGAUUCAGGCGAC   1   =||||||||||||||||||||||| targets:63   UUGCCUGUCAAGCUAAGUCCGCUG   86 Target Full Sequence	0.0	Sequence 6954 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008680931.2	ncRNA:24   GACG---GACAGUUCGAUUCAGGCGAC   1   ||||---|||||*||||=||||||||| targets:38   CUGCAUCCUGUCUAGCUGAGUCCGCUG   64 Target Full Sequence	2.5	PREDICTED: Zea mays ethylene receptor 3 (LOC103654108), mRNA	NA	coding protein	psRNATarget