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BaseInfo

ncRNA ID novel_zma_miR13078
Species Zea mays
Class miRNA
Genome position Chr6:68258726-68258840 [-]
Reference genome RefGen_v4
Source SRR5451004
Length 24
Mature sequence(if miRNA) 1 - UUUUUAUAAAAGUUGUAGGAAGUU - 24
Stem-loop(if miRNA) --     G               UAC          U    UU      U    - UAC
  CUUCU ACAACUUUUAUAAAA   CGUAGGAAGU AUGU  AUUUUC AGAG C   C
  ||||| |||||||||||||||   |||||||||| ||||  |||||| |||| |
  GAAGG UGUUGAAAAUAUUUU   GUAUCCUUUA UGUA  UGAAAG UCUC G   A
UU     A               UUA          -    -U      C    C UUG
Stem-loop sequence CUUCUGACAACUUUUAUAAAAUACCGUAGGAAGUUAUGUUUAUUUUCUAGAGCUACCAGUUGCCUCUCGAAAGUUAUGUAUUUCCUAUGAUUUUUUAUAAAAGUUGUAGGAAGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU949881.1
ncRNA:24   UUGAAGGAUGUUGAAAAUAUUUUU   1
  |||||||||||=||||||||||||
targets:1130   AACUUCCUACAGCUUUUAUAAAAA   1153

1.5 Zea mays clone 450754 mRNA sequence NA coding protein psRNATarget