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BaseInfo

ncRNA ID novel_zma_miR13070
Species Zea mays
Class miRNA
Genome position Chr6:18982020-18982121 [+]
Reference genome RefGen_v4
Source SRR5451004
Length 24
Mature sequence(if miRNA) 1 - AAGGAUCCUUUGCCGAGUGUCUAU - 24
Stem-loop(if miRNA) -    -A                 AUCAUCUA               UAAC
 AAGG  UCCUUUGCCGAGUGUCU        ACACUCGGCAAAGAU    U
 ||||  |||||||||||||||||        |||||||||||||||
 UUUC  AGGAAACGGCUCACGGG        UGUGAGCCGUUUCUA    U
G    GG                 GGUCCCAC               CACA
Stem-loop sequence AAGGAUCCUUUGCCGAGUGUCUAUCAUCUAACACUCGGCAAAGAUUAACUUACACAUCUUUGCCGAGUGUCACCCUGGGGGCACUCGGCAAAGGAGGCUUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008658185.2
ncRNA:24   UAUCUGUGAGCCGUUUCCUAGGAA   1
  =**|||=||||||||||||||*||
targets:1754   GACGACGCUCGGCAAAGGAUCGUU   1777

2.5 PREDICTED: Zea mays putative F-box/LRR-repeat protein At3g58880 (LOC103635804), mRNA NA coding protein psRNATarget