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BaseInfo

ncRNA ID	novel_zma_miR13069
Species	Zea mays
Class	miRNA
Genome position	Chr6:156064550-156064682 [+]
Reference genome	RefGen_v4
Source	SRR5451004
Length	24
Mature sequence(if miRNA)	110 - ACGAUUUGUAGUGGCGGUUUUCUU - 133
Stem-loop(if miRNA)	--       A      G                    A               G   G  G        GAAAACC CCACUA AAAUCGUAUUUCUACUGGCG UUCCUUAAGAAAACC CCA UA AAAUCC   ||||||| |||||| |||||||||||||||||||| ||||||||||||||| ||| || |||||A   CUUUUGG GGUGAU UUUAGCAUAAAGAUGACCGC AAGGAAUUCUUUUGG GGU AU UUUAGU UU       C      G                    C               G   G  G
Stem-loop sequence	GAAAACCACCACUAGAAAUCGUAUUUCUACUGGCGAUUCCUUAAGAAAACCGCCAGUAGAAAUCCAUGAUUUGUAGUGGGGGUUUUCUUAAGGAACCGCCAGUAGAAAUACGAUUUGUAGUGGCGGUUUUCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI405882.1	ncRNA:24   UUCUUUUGGCGGUGAUGUUUAGCA   1   ||||||||||||||||*||||||| targets:34   AAGAAAACCGCCACUAGAAAUCGU   57 Target Full Sequence	1.5	Sequence 4007 from Patent EP2074227	NA	coding protein	psRNATarget
JB166343.1	ncRNA:24   UUCUUUUGGCGGUGAUGUUUAGCA   1   ||||||||||||||||*||||||| targets:34   AAGAAAACCGCCACUAGAAAUCGU   57 Target Full Sequence	1.5	Sequence 4007 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238012.1	ncRNA:24   UUCUUUUGGCGGUGAUGUUUAGCA   1   ||||||||||||||||*||||||| targets:34   AAGAAAACCGCCACUAGAAAUCGU   57 Target Full Sequence	1.5	Sequence 4007 from Patent EP2985353	NA	coding protein	psRNATarget
JB163447.1	ncRNA:24   UUCUUUUGGCGGUGAUGUUUAGCA   1   ||||||||||||||||*||||||| targets:12   AAGAAAACCGCCACUAGAAAUCGU   35 Target Full Sequence	1.5	Sequence 1111 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235116.1	ncRNA:24   UUCUUUUGGCGGUGAUGUUUAGCA   1   ||||||||||||||||*||||||| targets:12   AAGAAAACCGCCACUAGAAAUCGU   35 Target Full Sequence	1.5	Sequence 1111 from Patent EP2985353	NA	coding protein	psRNATarget
HI402986.1	ncRNA:24   UUCUUUUGGCGGUGAUGUUUAGCA   1   ||||||||||||||||*||||||| targets:12   AAGAAAACCGCCACUAGAAAUCGU   35 Target Full Sequence	1.5	Sequence 1111 from Patent EP2074227	NA	coding protein	psRNATarget
HI403012.1	ncRNA:24   UUCUUUUGGCGGUGAUGUUUAGCA   1   *|**||||||=|||||||||||*| targets:30   UAAUAAACCGUCACUACAAAUCAU   53 Target Full Sequence	2.5	Sequence 1137 from Patent EP2074227	NA	coding protein	psRNATarget
JB163473.1	ncRNA:24   UUCUUUUGGCGGUGAUGUUUAGCA   1   *|**||||||=|||||||||||*| targets:30   UAAUAAACCGUCACUACAAAUCAU   53 Target Full Sequence	2.5	Sequence 1137 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235142.1	ncRNA:24   UUCUUUUGGCGGUGAUGUUUAGCA   1   *|**||||||=|||||||||||*| targets:30   UAAUAAACCGUCACUACAAAUCAU   53 Target Full Sequence	2.5	Sequence 1137 from Patent EP2985353	NA	coding protein	psRNATarget