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BaseInfo

ncRNA ID novel_zma_miR13063
Species Zea mays
Class miRNA
Genome position Chr6:91001152-91001218 [+]
Reference genome RefGen_v4
Source SRR5451004;SRR2089705
Length 24
Mature sequence(if miRNA) 44 - GACGAGCGUCGUGGCGUUGUCGGC - 67
Stem-loop(if miRNA) --        GA   AUAC     -- CUGGGAUGCA
  CGGCAACG  CAC    GCGUC  C          U
  ||||||||  |||    |||||  |
  GCUGUUGC  GUG    CUGCG  C          G
CG        -G   ----     AG AGUGGAUGCA
Stem-loop sequence CGGCAACGGACACAUACGCGUCCCUGGGAUGCAUGACGUAGGUGACGAGCGUCGUGGCGUUGUCGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008652469.2
ncRNA:24   CGGCUGUUGCGGUGCUGCGAGCAG   1
  |=||||||||||||||||||||||
targets:567   GUCGACAACGCCACGACGCUCGUC   590

0.0 PREDICTED: Zea mays serine/threonine receptor-like kinase NFP (LOC103631595), mRNA NA coding protein psRNATarget
XM_008659471.1
ncRNA:24   CGGCUGUUGCGGUGCUGCGAGCAG   1
  ||--|||=|*||||||||||||||
targets:228   GC--ACAGCCCCACGACGCUCGUC   249

2.0 PREDICTED: Zea mays fe(2+) transport protein 1-like (LOC103637234), mRNA NA coding protein psRNATarget