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BaseInfo

ncRNA ID	novel_zma_miR13061
Species	Zea mays
Class	miRNA
Genome position	Chr6:85803749-85803827 [+]
Reference genome	RefGen_v4
Source	SRR5451004
Length	24
Mature sequence(if miRNA)	1 - GGAGGGGAUUGAAGAGGAUUAAAU - 24
Stem-loop(if miRNA)	-G             AG A       C CUG   U   A   GAGGGGAUUGAAG  G UUAAAUC C   CUA UCA A   |||||||||||||  | ||||||| |   ||| |||   CUCCCCUAAUUUC  C AAUUUAG G   GAU AGU U AA             CU A       A AAA   C   A
Stem-loop sequence	GGAGGGGAUUGAAGAGGAUUAAAUCCCCUGCUAUUCAAAUAUGACUAGAAAGAGAUUUAAACUCCUUUAAUCCCCUCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT017648.1	ncRNA:24   UAAAUUAGGAGAAGUUAGGGGAGG   1   ||||||*|||||*||||||||||| targets:163   AUUUAAGCCUCUCCAAUCCCCUCC   186 Target Full Sequence	2.5	Zea mays clone EL01N0439D04.c mRNA sequence	NA	coding protein	psRNATarget
XM_020547043.1	ncRNA:24   UAAAUUAGGAGAAGUUAGGGGAGG   1   ||||=||||*|*|||||||||||| targets:3169   AUUUGAUCCCCCUCAAUCCCCUCC   3192 Target Full Sequence	2.5	PREDICTED: Zea mays protein FAR1-RELATED SEQUENCE 6 (LOC103644317), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008654495.2	ncRNA:24   UAAAUUAGGAGAAGUUAGGGGAGG   1   ||||*|*||*|||||||||||||| targets:1109   AUUUUAGCCCCUUCAAUCCCCUCC   1132 Target Full Sequence	2.0	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget
XM_008670891.2	ncRNA:24   UAAAUUAGGAGAAGUUAGGGGAGG   1   ||||*||||*||*||||||||||| targets:1637   AUUUUAUCCCCUCCAAUCCCCUCC   1660 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008670892.2	ncRNA:24   UAAAUUAGGAGAAGUUAGGGGAGG   1   ||||*||||*||*||||||||||| targets:1604   AUUUUAUCCCCUCCAAUCCCCUCC   1627 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008670890.2	ncRNA:24   UAAAUUAGGAGAAGUUAGGGGAGG   1   ||||*||||*||*||||||||||| targets:1580   AUUUUAUCCCCUCCAAUCCCCUCC   1603 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008670893.2	ncRNA:24   UAAAUUAGGAGAAGUUAGGGGAGG   1   ||||*||||*||*||||||||||| targets:1560   AUUUUAUCCCCUCCAAUCCCCUCC   1583 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X4, mRNA	NA	coding protein	psRNATarget
BT065170.1	ncRNA:24   UAAAUUAGGAGAAGUUAGGGGAGG   1   ||||*||||*||*||||||||||| targets:680   AUUUUAUCCCCUCCAAUCCCCUCC   703 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0017F16 mRNA, complete cds	NA	coding protein	psRNATarget