Search result

BaseInfo

ncRNA ID novel_zma_miR13052
Species Zea mays
Class miRNA
Genome position Chr5:19027819-19027899 [-]
Reference genome RefGen_v4
Source SRR5451004
Length 24
Mature sequence(if miRNA) 58 - AGAACUCGGCUCUCGGCAAAGAUA - 81
Stem-loop(if miRNA) --A    -U    U          AUAAC           UUA
   GAAC  CGGC CUCGGCAAAG     GGCCGUCAGCU   G
   ||||  |||| ||||||||||     |||||||||||   A
   CUUG  GUUG GAGCCGUUUC     CCGGCAGUCGG   C
CCG    CC    C          -----           CGG
Stem-loop sequence AGAACUCGGCUCUCGGCAAAGAUAACGGCCGUCAGCUUUAGACGGCGGCUGACGGCCCUUUGCCGAGCGUUGCCGUUCGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU954835.1
ncRNA:24   AUAG-AAACGGCUCUCG-GCUCAAGA   1
  ||*|-||||||||||||-||||||||
targets:257   UACCAUUUGCCGAGAGCACGAGUUCU   282

3.0 Zea mays clone 1486865 mRNA sequence NA coding protein psRNATarget
EU955006.1
ncRNA:24   AUAG-AAACGGCUCUCG-GCUCAAGA   1
  ||*|-||||||||||||-||||||||
targets:257   UACCAUUUGCCGAGAGCACGAGUUCU   282

3.0 Zea mays clone 1501317 mRNA sequence NA coding protein psRNATarget