Search result

BaseInfo

ncRNA ID osa-miRf10901-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - AGUCAUCUGUGACGGGCAUUAA - NA
Stem-loop(if miRNA)    --G G                        A
GAU   A UCAUCUGUGACGGGCAUUAACUAU G
|||   | ||||||||||||||||||||||||
CUA   U AGUAGACACUGCCCGUAAUUGAUA C
   AUA G                        C
Stem-loop sequence GAUGAGUCAUCUGUGACGGGCAUUAACUAUAGCCAUAGUUAAUGCCCGUCACAGAUGAGUAUAAUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB164315.1
ncRNA:22   AAUUACGGGCAGUGUCUACUGA   1
  *|||*|||||||||||||||||
targets:81   CUAAAGCCCGUCACAGAUGACU   102

1.0 Sequence 1979 from Patent EP2559767 NA coding protein psRNATarget
LQ235984.1
ncRNA:22   AAUUACGGGCAGUGUCUACUGA   1
  *|||*|||||||||||||||||
targets:81   CUAAAGCCCGUCACAGAUGACU   102

1.0 Sequence 1979 from Patent EP2985353 NA coding protein psRNATarget
HI403854.1
ncRNA:22   AAUUACGGGCAGUGUCUACUGA   1
  *|||*|||||||||||||||||
targets:81   CUAAAGCCCGUCACAGAUGACU   102

1.0 Sequence 1979 from Patent EP2074227 NA coding protein psRNATarget
HI403775.1
ncRNA:22   AAUUACGGGCAGUGUCUACUGA   1
  *|||*|||||||||||||||||
targets:86   CUAAAGCCCGUCACAGAUGACU   107

1.0 Sequence 1900 from Patent EP2074227 NA coding protein psRNATarget
JB164236.1
ncRNA:22   AAUUACGGGCAGUGUCUACUGA   1
  *|||*|||||||||||||||||
targets:86   CUAAAGCCCGUCACAGAUGACU   107

1.0 Sequence 1900 from Patent EP2559767 NA coding protein psRNATarget
LQ235905.1
ncRNA:22   AAUUACGGGCAGUGUCUACUGA   1
  *|||*|||||||||||||||||
targets:86   CUAAAGCCCGUCACAGAUGACU   107

1.0 Sequence 1900 from Patent EP2985353 NA coding protein psRNATarget
AK064906.1
ncRNA:22   AAUUACGGGCAGUGUCUACUGA   1
  |*||*|||||||||=|||||||
targets:2260   UAAAAGCCCGUCACGGAUGACU   2281

2.5 Oryza sativa Japonica Group cDNA clone:J013000L21, full insert sequence NA coding protein psRNATarget
AK064906.1
ncRNA:22   AAUUACGGGCAGUGUCUACUGA   1
  **||*|||||||||||||||*|
targets:2044   ACAAAGCCCGUCACAGAUGAGU   2065

2.5 Oryza sativa Japonica Group cDNA clone:J013000L21, full insert sequence NA coding protein psRNATarget
AK119390.1
ncRNA:22   AAUUACGGGCAGUGUCUACUGA   1
  *|||*|||||||||*|||||||
targets:3125   CUAAAGCCCGUCACCGAUGACU   3146

2.5 Oryza sativa Japonica Group cDNA clone:001-132-C09, full insert sequence NA coding protein psRNATarget
AK072475.1
ncRNA:22   AAUUACGGGCAGUGUCUACUGA   1
  ||*|||||*||||||*||||||
targets:43   UUCAUGCCAGUCACAAAUGACU   64

2.5 Oryza sativa Japonica Group cDNA clone:J023124E17, full insert sequence NA coding protein psRNATarget
AK106899.1
ncRNA:22   AAUUACGGGCAGUGUCUACUGA   1
  |*=|||||*||||*||||||||
targets:951   UGGAUGCCGGUCAGAGAUGACU   972

2.5 Oryza sativa Japonica Group cDNA clone:002-118-H06, full insert sequence NA coding protein psRNATarget
CT828118.1
ncRNA:22   AAUUACGGGCAGUGUCUACUGA   1
  |*=|||||*||||*||||||||
targets:539   UGGAUGCCGGUCAGAGAUGACU   560

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA217B17, full insert sequence NA coding protein psRNATarget