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BaseInfo

ncRNA ID novel_zma_miR13024
Species Zea mays
Class miRNA
Genome position Chr5:79248873-79248969 [+]
Reference genome RefGen_v4
Source SRR5451004
Length 24
Mature sequence(if miRNA) 74 - GAGCGGACUGGGAACGGAGCGGCU - 97
Stem-loop(if miRNA) -- G          UU     G  G  G  GGAGGC UGCGAGCUACUGC
  C GCUCUGUUCU  GUUUG UU CA AG      G             G
  | ||||||||||  ||||| || || ||      |
  G CGAGGCAAGG  CAGGC AG GU UC      C             C
UC G          GU     G  G  G  ---GAG GAGAGGAUAGACA
Stem-loop sequence CGGCUCUGUUCUUUGUUUGGUUGCAGAGGGAGGCGUGCGAGCUACUGCGCACAGAUAGGAGAGCGAGCUGUGGGAGCGGACUGGGAACGGAGCGGCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY111106.1
ncRNA:24   UCGGCGAGGCAAGGGUCAGGCGAG   1
  |||||||||||||||||*||||||
targets:319   AGCCGCUCCGUUCCCAGCCCGCUC   342

1.5 Zea mays CL29481_1 mRNA sequence NA coding protein psRNATarget