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BaseInfo

ncRNA ID novel_zma_miR13019
Species Zea mays
Class miRNA
Genome position Chr4:132271493-132271571 [-]
Reference genome RefGen_v4
Source SRR5451004
Length 24
Mature sequence(if miRNA) 1 - UUAAGUUGGAAUAAUUCGGUCGGU - 24
Stem-loop(if miRNA) --U   -GU        U          ---     A   U
   GAC   GUUAUUCC AUUUAAGUGU   GGUCU GCC C
   |||   |||||||| ||||||||||   ||||| ||| U
   CUG   UAAUAAGG UGAAUUCACG   UCAGG CGG A
UGG   GCU        U          GAU     A   A
Stem-loop sequence UGACGUGUUAUUCCUAUUUAAGUGUGGUCUAGCCUCUAAGGCAGGACUUAGGCACUUAAGUUGGAAUAAUUCGGUCGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT084202.2
ncRNA:24   UGGCUGGCUUAAUAAGGUUGAAUU   1
  ||=|*||*||||||||||||||||
targets:342   ACUGCCCAAAUUAUUCCAACUUAA   365

1.0 Zea mays full-length cDNA clone ZM_BFb0088N15 mRNA, complete cds NA coding protein psRNATarget