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BaseInfo

ncRNA ID novel_zma_miR13016
Species Zea mays
Class miRNA
Genome position Chr2:106619259-106619318 [-]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 37 - CGGAUAUAAGCUUAUGUUCGACGG - 60
Stem-loop(if miRNA) --               G   GAC  -  G
  CGGAUAUAAGCUUAU UUC   GG CC C
  ||||||||||||||| |||   || || U
  GCCUGUAUUCGAAUA AAG   CC GG G
CA               A   AUC  A  A
Stem-loop sequence CGGAUAUAAGCUUAUGUUCGACGGCCGCUGAGGACCCUAGAAAAUAAGCUUAUGUCCGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008676706.2
ncRNA:24   GGCAGCUUGUAUUCGAAUAUAGGC   1
  ****|||=||*||||||||||||*
targets:1737   GGCACGAGCAGAAGCUUAUAUCCU   1760

3.0 PREDICTED: Zea mays hypothetical protein (LOC103651103), mRNA NA coding protein psRNATarget