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BaseInfo

ncRNA ID	osa-miRf10898-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - GGGAAAUUGGAACCAUGCCACUUC - NA
Stem-loop(if miRNA)	U          -        A CA              A        UG   CCCUAGAC     -----  CCACGUGUUAGUCCCAUCUUCCUUCAUCC  GGAAUUUGGG AAAUUGGA C  UGCCACUUCGUCGC UUUUCCGU  GAA        AUGGG     AC                             U  |||||||||| |||||||| |  |||||||||||||| ||||||||  |||        |||||     ||  CCUUAAACCC UUUAACCU G  ACGGUGAGGCAGCG AAAAGGCA  UUU        AGAGG     GG                             C A          C        C AC              C        GU   -------U     UAAUC  AGUUAACGUGCACUCCUUCUUUCUUCUCA
Stem-loop sequence	UGGAAUUUGGGAAAUUGGAACCAUGCCACUUCGUCGCAUUUUCCGUUGGAACCCUAGACAUGGGACCCACGUGUUAGUCCCAUCUUCCUUCAUCCUCACUCUUCUUUCUUCCUCACGUGCAAUUGAGGCUAAUGGAGAUUUUUGACGGAAAACGCGACGGAGUGGCACAGCUCCAAUUUCCCCAAAUUCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015765381.1	ncRNA:24   CUUCACCGUACCAAGGUUAAAGGG   1   |||||||||||||||||||||||| targets:1014   GAAGUGGCAUGGUUCCAAUUUCCC   1037 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group laforin, isoform 9-like (LOC107279843), mRNA	laforin, isoform 9-like(LOC107279843)	coding protein	psRNATarget
AK071473.1	ncRNA:24   CUUCACCGUACCAAGGUUAAAGGG   1   |||||||||||||||||||||||| targets:755   GAAGUGGCAUGGUUCCAAUUUCCC   778 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J023098B17, full insert sequence	NA	coding protein	psRNATarget
AK242376.1	ncRNA:24   CUUCACCGUACCAAGGUUAAAGGG   1   |*|||||||||||||||||||=|| targets:650   GCAGUGGCAUGGUUCCAAUUUUCC   673 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J080039H07, full insert sequence	NA	coding protein	psRNATarget
XM_015787049.1	ncRNA:24   CUUCACCGUACCAAGGUUAAAGGG   1   |*|||||||||||||||||||=|| targets:895   GCAGUGGCAUGGUUCCAAUUUUCC   918 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9271417 (LOC9271417), mRNA	uncharacterized LOC9271417(LOC9271417)	coding protein	psRNATarget
AK121322.1	ncRNA:24   CUUCACCGUACCAAGGUUAAAGGG   1   |=|||||||*|||||=|||||||| targets:2520   GGAGUGGCACGGUUCUAAUUUCCC   2543 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J023114F09, full insert sequence	NA	coding protein	psRNATarget
XM_015777657.1	ncRNA:24   CUUCACCGUACCAAGGUUAAAGGG   1   *||-|||||||||||||||||=|| targets:2966   UAA-UGGCAUGGUUCCAAUUUUCC   2988 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group zinc finger A20 and AN1 domain-containing stress-associated protein 7 (LOC4334394), transcript variant X3, mRNA	zinc finger A20 and AN1 domain-containing stress-associated protein 7(LOC4334394)	coding protein	psRNATarget
AK288486.1	ncRNA:24   CUUCACCGUACCAAGGUUAAA-GGG   1   *||**||||||||||||||||-||| targets:380   AAAACGGCAUGGUUCCAAUUUACCC   404 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090040F02, full insert sequence	NA	coding protein	psRNATarget
XM_015767698.1	ncRNA:24   CUUC--ACCGUACCAAGGUUAAAGGG   1   *=||--|||||*||||||||*||||| targets:1490   UGAGCAUGGCAAGGUUCCAACUUCCC   1515 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329315 (LOC4329315), mRNA	uncharacterized LOC4329315(Os02g0464450)	coding protein	psRNATarget