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BaseInfo

ncRNA ID novel_zma_miR12989
Species Zea mays
Class miRNA
Genome position Chr2:156033573-156033671 [-]
Reference genome RefGen_v4
Source SRR1997866
Length 24
Mature sequence(if miRNA) 76 - AGGAUAUUUACACUGGCGGUUGGU - 99
Stem-loop(if miRNA) --         A                                A    
  AGGAUAUUU CACUGGCGGUUGGUGUAACAGAACCGCCAGUG AAAUA
  ||||||||| |||||||||||||||||||||||||||||||| ||||U
  UCCUAUAAA GUGACCGCCAACCACAUUGUCUUGGCGGUCAC UUUAA
UA         G                                C    
Stem-loop sequence AGGAUAUUUACACUGGCGGUUGGUGUAACAGAACCGCCAGUGAAAAUAUAAUUUCCACUGGCGGUUCUGUUACACCAACCGCCAGUGGAAAUAUCCUAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ101180.1
ncRNA:24   UGGUUGGCGGUCACAUUUAUAGGA   1
  ||||||||||||||*|||||||||
targets:78   ACCAACCGCCAGUGGAAAUAUCCU   101

1.5 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget