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BaseInfo

ncRNA ID novel_zma_miR12987
Species Zea mays
Class miRNA
Genome position Chr4:63543810-63543888 [+]
Reference genome RefGen_v4
Source SRR5451004
Length 24
Mature sequence(if miRNA) 56 - UUAAGUUGGAAUAAUUCGGUCGGU - 79
Stem-loop(if miRNA) --U   -  U      UG      UU   G  UU -   UU
   GAC GA UUAUUC  AUUUAA  GUG CC  G CCU  A
   ||| || ||||||  ||||||  ||| ||  | |||  U
   CUG CU AAUAAG  UGAAUU  CAC GG  C GGG  G
UGG   G  U      GU      --   G  UU A   UG
Stem-loop sequence UGACGAUUUAUUCUGAUUUAAUUGUGGCCUUGCCUUUAUGGUGGGACUUGGGCACUUAAGUUGGAAUAAUUCGGUCGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT084202.2
ncRNA:24   UGGCUGGCUUAAUAAGGUUGAAUU   1
  ||=|*||*||||||||||||||||
targets:342   ACUGCCCAAAUUAUUCCAACUUAA   365

1.0 Zea mays full-length cDNA clone ZM_BFb0088N15 mRNA, complete cds NA coding protein psRNATarget