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BaseInfo

ncRNA ID	novel_zma_miR12986
Species	Zea mays
Class	miRNA
Genome position	Chr3:3248421-3248479 [-]
Reference genome	RefGen_v4
Source	SRR5451004
Length	22
Mature sequence(if miRNA)	1 - UGUCUGGUGAAUUUUAGCGGAG - 22
Stem-loop(if miRNA)	--       --C          -       G   CCGCUGG   UCAUCGGACA GUCCGGU U   |||||||   |||||||||| |||||||   GGCGAUU   AGUGGUCUGU CAGGCCA G GA       UUA          A       C
Stem-loop sequence	CCGCUGGCUCAUCGGACAGUCCGGUGUGCACCGGACAUGUCUGGUGAAUUUUAGCGGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ242140.1	ncRNA:22   GAGGCGAUUUUAAGUGGUCUGU   1   ||||||||*||||||||||||| targets:91   CUCCGCUAUAAUUCACCAGACA   112 Target Full Sequence	1.0	Sequence 8135 from Patent EP2985353	NA	coding protein	psRNATarget
HI410010.1	ncRNA:22   GAGGCGAUUUUAAGUGGUCUGU   1   ||||||||*||||||||||||| targets:91   CUCCGCUAUAAUUCACCAGACA   112 Target Full Sequence	1.0	Sequence 8135 from Patent EP2074227	NA	coding protein	psRNATarget
JB170471.1	ncRNA:22   GAGGCGAUUUUAAGUGGUCUGU   1   ||||||||*||||||||||||| targets:91   CUCCGCUAUAAUUCACCAGACA   112 Target Full Sequence	1.0	Sequence 8135 from Patent EP2559767	NA	coding protein	psRNATarget
HI409848.1	ncRNA:22   GAGGCGAUUUUAAGUGGUCUGU   1   ||||||||*||||||||=|||| targets:82   CUCCGCUAUAAUUCACCGGACA   103 Target Full Sequence	2.5	Sequence 7973 from Patent EP2074227	NA	coding protein	psRNATarget
LQ241978.1	ncRNA:22   GAGGCGAUUUUAAGUGGUCUGU   1   ||||||||*||||||||=|||| targets:82   CUCCGCUAUAAUUCACCGGACA   103 Target Full Sequence	2.5	Sequence 7973 from Patent EP2985353	NA	coding protein	psRNATarget
JB170309.1	ncRNA:22   GAGGCGAUUUUAAGUGGUCUGU   1   ||||||||*||||||||=|||| targets:82   CUCCGCUAUAAUUCACCGGACA   103 Target Full Sequence	2.5	Sequence 7973 from Patent EP2559767	NA	coding protein	psRNATarget
BT069634.1	ncRNA:22   GAGGCGAUUUUAAGUGGUCUGU   1   ||||||||*||||||||=|||| targets:694   CUCCGCUAUAAUUCACCGGACA   715 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0193J19 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176828.1	ncRNA:22   GAGGCGAUUUUAAGUGGUCUGU   1   ||||||||*||||||||=|||| targets:694   CUCCGCUAUAAUUCACCGGACA   715 Target Full Sequence	2.5	Zea mays uncharacterized LOC100384263 (LOC100384263), mRNA	NA	coding protein	psRNATarget
EZ077288.1	ncRNA:22   GAGGCGAUUUUAAGUGGUCUGU   1   ||||||||*||||||||||||* targets:30   CUCCGCUAUAAUUCACCAGACU   51 Target Full Sequence	2.0	TSA: Zea mays contig12925, mRNA sequence	NA	coding protein	psRNATarget
EZ112673.1	ncRNA:22   GAGGCGAUUUUAAGUGGUCUGU   1   ||||||||*||||||||||||* targets:51   CUCCGCUAUAAUUCACCAGACU   72 Target Full Sequence	2.0	TSA: Zea mays contig48334, mRNA sequence	NA	coding protein	psRNATarget