Search result

BaseInfo

ncRNA ID	novel_zma_miR12971
Species	Zea mays
Class	miRNA
Genome position	Chr3:201834-201915 [+]
Reference genome	RefGen_v4
Source	SRR5451004
Length	24
Mature sequence(if miRNA)	59 - UGGGCUGGACGGUCCGCGCGUGCG - 82
Stem-loop(if miRNA)	---C  -                UG    -     G     C     CG GCGGACUGUCCGGCCC  AGGC CGGAC GUCCG G     || ||||||||||||||||  |||| ||||| ||||| G     GC CGCCUGGCAGGUCGGG  UCCG GCCUG CAGGC U GCGU  G                UG    C     G     C
Stem-loop sequence	CCGGCGGACUGUCCGGCCCUGAGGCCGGACGGUCCGCGGUCCGGACGGUCCGCGCCUGUGGGCUGGACGGUCCGCGCGUGCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ061701.1	ncRNA:24   GCGUGCGCGCCUGGCAGGUCGGGU   1   ||||||||||||||||||=||||| targets:173   CGCACGCGCGGACCGUCCGGCCCA   196 Target Full Sequence	1.5	TSA: Zea mays contig62823, mRNA sequence	NA	coding protein	psRNATarget
EU940813.1	ncRNA:24   GCGUGCGCGCCUGGCAGGUCGGGU   1   ||||||||||||||||||=||||| targets:33   CGCACGCGCGGACCGUCCGGCCCA   56 Target Full Sequence	1.5	Zea mays clone 1145688 mRNA sequence	NA	coding protein	psRNATarget
EZ059430.1	ncRNA:24   GCGUGCGCGCCUGGCAGGUCGGGU   1   ||||||=|||||||||||=||||| targets:20   CGCACGUGCGGACCGUCCGGCCCA   43 Target Full Sequence	2.5	TSA: Zea mays contig60552, mRNA sequence	NA	coding protein	psRNATarget