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BaseInfo

ncRNA ID novel_zma_miR12964
Species Zea mays
Class miRNA
Genome position Chr3:230742806-230742893 [-]
Reference genome RefGen_v4
Source SRR5451004
Length 24
Mature sequence(if miRNA) 1 - UGGAUUUCUACUGGCGGUUUUCAU - 24
Stem-loop(if miRNA) --           C        ---        CA     -    U
  GGAAACCGCCA UAGAAAUC   GAUUUUUA  GGCGG UUUC U
  ||||||||||| ||||||||   ||||||||  ||||| ||||
  CUUUUGGCGGU AUCUUUAG   CUAAAGAU  CCGCC AAAG A
UA           C        GUA        CA     U    A
Stem-loop sequence GGAAACCGCCACUAGAAAUCGAUUUUUACAGGCGGUUUCUUAAGAAAUCCGCCACUAGAAAUCAUGGAUUUCUACUGGCGGUUUUCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235116.1
ncRNA:24   UACUUUUGGCGGUCAUCUUUAGGU   1
  ||||||||||=|*|||||||||||
targets:56   AUGAAAACCGUCUGUAGAAAUCCA   79

2.5 Sequence 1111 from Patent EP2985353 NA coding protein psRNATarget
HI402986.1
ncRNA:24   UACUUUUGGCGGUCAUCUUUAGGU   1
  ||||||||||=|*|||||||||||
targets:56   AUGAAAACCGUCUGUAGAAAUCCA   79

2.5 Sequence 1111 from Patent EP2074227 NA coding protein psRNATarget
JB163447.1
ncRNA:24   UACUUUUGGCGGUCAUCUUUAGGU   1
  ||||||||||=|*|||||||||||
targets:56   AUGAAAACCGUCUGUAGAAAUCCA   79

2.5 Sequence 1111 from Patent EP2559767 NA coding protein psRNATarget