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BaseInfo

ncRNA ID	novel_zma_miR12957
Species	Zea mays
Class	miRNA
Genome position	Chr5:201155772-201155832 [+]
Reference genome	RefGen_v4
Source	SRR1583942
Length	24
Mature sequence(if miRNA)	1 - GAGCUAAACGAGCCAACUCGAGUU - 24
Stem-loop(if miRNA)	--        C  G   A    A   -A  AA   GAGCUAAA GA CCA CUCG GUU  GC  A   |||||||| || ||| |||| |||  ||   CUCGAUUU CU GGU GAGC CGA  UG  C UG        -  A   C    -   GC  AG
Stem-loop sequence	GAGCUAAACGAGCCAACUCGAGUUAGCAAACGAGUCGAGCCGAGCUGGAUCUUUAGCUCGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU950141.1	ncRNA:24   UUGAGCUCAACCGAGCAAAUCGAG   1   |=||||||*||||||||||||||| targets:321   AGCUCGAGCUGGCUCGUUUAGCUC   344 Target Full Sequence	1.0	Zea mays clone 462989 mRNA sequence	NA	coding protein	psRNATarget
XM_008663462.2	ncRNA:24   UUGAGCUCAACCGAGCAAAUCGAG   1   |=||||||*|||||=||||||||| targets:1759   AGCUCGAGGUGGCUUGUUUAGCUC   1782 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC100274870), transcript variant X3, mRNA	NA	coding protein	psRNATarget
LQ238319.1	ncRNA:24   UUGAGCUCAACCGAGCAAAUCGAG   1   |=||=|||||**|||||||||||| targets:49   AGCUUGAGUUAACUCGUUUAGCUC   72 Target Full Sequence	2.5	Sequence 4314 from Patent EP2985353	NA	coding protein	psRNATarget
HI406189.1	ncRNA:24   UUGAGCUCAACCGAGCAAAUCGAG   1   |=||=|||||**|||||||||||| targets:49   AGCUUGAGUUAACUCGUUUAGCUC   72 Target Full Sequence	2.5	Sequence 4314 from Patent EP2074227	NA	coding protein	psRNATarget
JB166650.1	ncRNA:24   UUGAGCUCAACCGAGCAAAUCGAG   1   |=||=|||||**|||||||||||| targets:49   AGCUUGAGUUAACUCGUUUAGCUC   72 Target Full Sequence	2.5	Sequence 4314 from Patent EP2559767	NA	coding protein	psRNATarget