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BaseInfo

ncRNA ID novel_zma_miR12952
Species Zea mays
Class miRNA
Genome position Chr3:134316058-134316217 [+]
Reference genome RefGen_v4
Source SRR5451004
Length 22
Mature sequence(if miRNA) 139 - UUGUGGAACUACCCUGAUGGUU - 160
Stem-loop(if miRNA) --    UG U  C     G       U          AG     A    GU -   -G   AAC    -   - --       AAU
  UUAU  G GU AGUUC GUAGUGG GUCAUGAUUA  GACUU UGGU  C GCA  CGA   UGAG AGC C  UCCUGUG   G
  ||||  | || ||||| ||||||| ||||||||||  ||||| ||||  | |||  |||   |||| ||| |  |||||||
  GGUA  C CA UCAAG UGUUACC UAGUACUGAU  CUGGA ACUA  G CGU  GCU   GCUC UCG G  AGGACAC   C
UU    GU C  -     G       -          CU     -    UG U   AG   ---    A   U UU       ACG
Stem-loop sequence UUAUUGGUGUCAGUUCGGUAGUGGUGUCAUGAUUAAGGACUUAUGGUGUCGCAGCGAAACUGAGAGCCUCCUGUGAAUGCGCACACAGGAUUGUGCUACUCGUCGGAUGCUGGUAUCAAGGUCUCUAGUCAUGAUCCAUUGUGGAACUACCCUGAUGGUU