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BaseInfo

ncRNA ID novel_zma_miR12943
Species Zea mays
Class miRNA
Genome position Chr2:9785805-9785946 [-]
Reference genome RefGen_v4
Source SRR5451004
Length 24
Mature sequence(if miRNA) 1 - GCGAGAGGCUGUAAAAGAAGAUGU - 24
Stem-loop(if miRNA) --    -        -  GG   A       -  A   U            U   AAAAUAAAUU       --G  UA
  AUCU CUUUUACA CC  CUC CAUCUAU AC UGA AGUCUAUAGAAA AUA          AUUAAAA   GU  A
  |||| |||||||| ||  ||| ||||||| || ||| |||||||||||| |||          |||||||   ||
  UAGA GAAAAUGU GG  GAG GUAGGUG UG ACU UCGGGUGUUUUU UAU          UAGUUUU   CG  G
UG    A        C  -A   C       G  A   U            U   ----------       AAA  UU
Stem-loop sequence AUCUCUUUUACACCGGCUCACAUCUAUACAUGAUAGUCUAUAGAAAUAUAAAAAUAAAUUAUUAAAAGGUUAAGUUGCAAAUUUUGAUUAUUUUUUUGUGGGCUUUCAAGUGGUGGAUGCGAGAGGCUGUAAAAGAAGAUGU