ncRNA ID | novel_zma_miR12943 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:9785805-9785946 [-] |
Reference genome | RefGen_v4 |
Source | SRR5451004 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GCGAGAGGCUGUAAAAGAAGAUGU - 24 |
Stem-loop(if miRNA) |
--    -        -  GG   A       -  A   U            U   AAAAUAAAUU       --G  UA   AUCU CUUUUACA CC  CUC CAUCUAU AC UGA AGUCUAUAGAAA AUA          AUUAAAA   GU  A   |||| |||||||| ||  ||| ||||||| || ||| |||||||||||| |||          |||||||   ||   UAGA GAAAAUGU GG  GAG GUAGGUG UG ACU UCGGGUGUUUUU UAU          UAGUUUU   CG  G UG    A        C  -A   C       G  A   U            U   ----------       AAA  UU |
Stem-loop sequence | AUCUCUUUUACACCGGCUCACAUCUAUACAUGAUAGUCUAUAGAAAUAUAAAAAUAAAUUAUUAAAAGGUUAAGUUGCAAAUUUUGAUUAUUUUUUUGUGGGCUUUCAAGUGGUGGAUGCGAGAGGCUGUAAAAGAAGAUGU |