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BaseInfo

ncRNA ID osa-miRf10890-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AGCACUUUGCUCUUGACGAG - NA
Stem-loop(if miRNA)    -CC         G                    AUG    ----AA       CGG    G
CCU   UCUUCUCGU AAGAGCAAAGUGUUGAUAAC   UUGA      AAGGGUA   GUCU A
|||   ||||||||| ||||||||||||||||||||   ||||      |||||||   |||| C
GGA   AGAAGAGCA UUCUCGUUUCACGAUUAUUG   GACU      UUCCUAU   UAGA U
   ACA         G                    GAA    AAGCCG       ---    A
Stem-loop sequence CCUCCUCUUCUCGUGAAGAGCAAAGUGUUGAUAACAUGUUGAAAAAGGGUACGGGUCUGACUAAGAUUAUCCUUGCCGAAUCAGAAGGUUAUUAGCACUUUGCUCUUGACGAGAAGAACAAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015787122.1
ncRNA:20   GAGCAGUUCUCGUUUCACGA   1
  *|*||||||*||||||||||
targets:936   GUAGUCAAGUGCAAAGUGCU   955

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4342111 (LOC4342111), mRNA uncharacterized LOC4342111(LOC4342111) coding protein psRNATarget