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BaseInfo

ncRNA ID ath-miRf10137-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - CUACUCGACCUCUGGGUCGAGUGGU - NA
Stem-loop(if miRNA)     UG --          C            UG   GAA UG U   G  ----CU          U
AUGA  G  CACUCGACCU GGGGUCGAGUGG  GUU   U  G GAU UC      CUACUCGACC G
||||  |  |||||||||| ||||||||||||  |||   |  | ||| ||      ||||||||||
UACU  U  GUGAGCUGGG CUCCAGCUCAUC  CGA   A  U CUA AG      GGUGAGCUGG U
    GU UG          U            CU   --- GU -   G  UUCUCU          U
Stem-loop sequence AUGAUGGCACUCGACCUCGGGGUCGAGUGGUGGUUGAAUUGGUGAUGUCCUCUACUCGACCUGUUGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCUCUGGGUCGAGUGGUUUGUCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY227642.1
ncRNA:25   UGGUGAGCUGGGUCUCCAGCUCAUC   1
  |||||||||||||||||||||||||
targets:762   ACCACUCGACCCAGAGGUCGAGUAG   786

0.0 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
EF183042.1
ncRNA:25   UGGUGAGCUGGGUCUCCAGCUCAUC   1
  |||||||||||**||||||||||||
targets:1525   ACCACUCGACCACGAGGUCGAGUAG   1549

2.5 Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence NA coding protein psRNATarget
AY227642.1
ncRNA:25   UGGUGAGCUGGGUCUCCAGCUCAUC   1
  *=|||||*|||=||||||||||||*
targets:925   CUCACUCUACCUAGAGGUCGAGUAU   949

3.0 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget