ncRNA ID | ath-miRf10137-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 25 |
Mature sequence(if miRNA) | NA - CUACUCGACCUCUGGGUCGAGUGGU - NA |
Stem-loop(if miRNA) |
    UG --          C            UG   GAA UG U   G  ----CU          U AUGA  G  CACUCGACCU GGGGUCGAGUGG  GUU   U  G GAU UC      CUACUCGACC G ||||  |  |||||||||| ||||||||||||  |||   |  | ||| ||      |||||||||| UACU  U  GUGAGCUGGG CUCCAGCUCAUC  CGA   A  U CUA AG      GGUGAGCUGG U     GU UG          U            CU   --- GU -   G  UUCUCU          U |
Stem-loop sequence | AUGAUGGCACUCGACCUCGGGGUCGAGUGGUGGUUGAAUUGGUGAUGUCCUCUACUCGACCUGUUGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCUCUGGGUCGAGUGGUUUGUCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY227642.1 |
|
0.0 | Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
EF183042.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
AY227642.1 |
|
3.0 | Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds | NA | coding protein | psRNATarget |