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BaseInfo

ncRNA ID novel_zma_miR12928
Species Zea mays
Class miRNA
Genome position Chr2:127885308-127885421 [-]
Reference genome RefGen_v4
Source SRR5451004
Length 22
Mature sequence(if miRNA) 1 - CCUCAGGAAAAAGUCGUGGGAC - 22
Stem-loop(if miRNA) --UA          C   -     --------------CCUCAC   GCGGAUGAUGGAAAUGA
    UAUGGCUUUU CCU AGGGU                    UAU                 A
    |||||||||| ||| |||||                    |||                 C
    GUGCUGAAAA GGA UCCCG                    CAG                 A
CAGG          A   C     ACUCCAUAUCCAAAACCAUG   CCUACCUGAAAUACGUC
Stem-loop sequence UAUAUGGCUUUUCCCUAGGGUCCUCACUAUGCGGAUGAUGGAAAUGAACACUGCAUAAAGUCCAUCCGACGUACCAAAACCUAUACCUCAGCCCUCAGGAAAAAGUCGUGGGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406464.1
ncRNA:22   CAGGGUGCUGAAAAAGGACUCC   1
  ||||||||=|||||||=|||||
targets:13   GUCCCACGGCUUUUUCUUGAGG   34

2.5 Sequence 4589 from Patent EP2074227 NA coding protein psRNATarget
LQ238594.1
ncRNA:22   CAGGGUGCUGAAAAAGGACUCC   1
  ||||||||=|||||||=|||||
targets:13   GUCCCACGGCUUUUUCUUGAGG   34

2.5 Sequence 4589 from Patent EP2985353 NA coding protein psRNATarget
JB166925.1
ncRNA:22   CAGGGUGCUGAAAAAGGACUCC   1
  ||||||||=|||||||=|||||
targets:13   GUCCCACGGCUUUUUCUUGAGG   34

2.5 Sequence 4589 from Patent EP2559767 NA coding protein psRNATarget