ncRNA ID | novel_zma_miR12920 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:2992796-2992933 [+] |
Reference genome | RefGen_v4 |
Source | SRR5451004;SRR1997866 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCCCUUAGGGCUGAUUUGGUGAC - 24 |
Stem-loop(if miRNA) |
--AU      -   C           -CCA          A     UA              GG    UA     CCCUUA GGG UGAUUUGGUGA    GGGAUCACGG GGGAU  GAGGGGAUUGAGGG  AAAU  G     |||||| ||| |||||||||||    |||||||||| |||||  ||||||||||||||  ||||     GGGAAU CCC AUUAAACCACU    CCCUAGUGCC CCCUA  CUCCCCUAACUCCC  UUUA  U AGUC      U   A           AUUC          C     GC              UU    UU |
Stem-loop sequence | AUCCCUUAGGGCUGAUUUGGUGACCAGGGAUCACGGAGGGAUUAGAGGGGAUUGAGGGGGAAAUUAGUUUAUUUUUCCCUCAAUCCCCUCCGAUCCCCCCGUGAUCCCCUUAUCACCAAAUUAACCCUUAAGGGCUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU941266.1 |
|
2.5 | Zea mays clone 1435213 mRNA sequence | NA | coding protein | psRNATarget |