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BaseInfo

ncRNA ID novel_zma_miR12913
Species Zea mays
Class miRNA
Genome position Chr2:236469080-236469158 [-]
Reference genome RefGen_v4
Source SRR5451004
Length 24
Mature sequence(if miRNA) 56 - AAAUGGAGUACUCGGCAAAGACGA - 79
Stem-loop(if miRNA) ---AAAU       U         --C  CGCUU  ACUCA
       GGAGUAC CGGCAAAGA   GA     CC     A
       ||||||| |||||||||   ||     ||     C
       CCUUAUG GCUGUUUCU   CU     GG     U
UCUACCG       -         CAU  AUUAU  CUACC
Stem-loop sequence AAAUGGAGUACUCGGCAAAGACGACGCUUCCACUCAACUCCAUCGGUAUUAUCUACUCUUUGUCGGUAUUCCGCCAUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT068102.2
ncRNA:24   AGCAGAAACGGCUCAUGAGGUAAA   1
  |=|||||||=|||*||||||||||
targets:499   UUGUCUUUGUCGAAUACUCCAUUU   522

2.5 Zea mays full-length cDNA clone ZM_BFb0040I04 mRNA, complete cds NA coding protein psRNATarget