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BaseInfo

ncRNA ID osa-miRf10888-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - AAAGCUGCCAGGAAGUUCCGGAC - NA
Stem-loop(if miRNA)   -    AC       G    G        --    UG
GG AAGA  UCCGGAA UUCC GGCAGCUU  UCUC  C
|| ||||  ||||||| |||| ||||||||  ||||  U
CC UUUU  AGGCCUU AAGG CCGUCGAA  AGAG  U
  G    CC       G    A        AA    UG
Stem-loop sequence GGAAGAACUCCGGAAGUUCCGGGCAGCUUUCUCUGCUUGUGAGAAAAAGCUGCCAGGAAGUUCCGGACCUUUUGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK289065.1
ncRNA:23   CAGGCCUUGAAGGACCGUCGAAA   1
  |*|||||||*|||||||||*|||
targets:842   GCCCGGAACCUCCUGGCAGGUUU   864

2.5 Oryza sativa Japonica Group cDNA, clone: J090093P18, full insert sequence NA coding protein psRNATarget
XM_015778757.1
ncRNA:23   CAGGCCUUGAAGGACCGUCGAAA   1
  |**||*||||||||*||||||||
targets:181   GGGCGAAACUUCCUAGCAGCUUU   203

2.5 PREDICTED: Oryza sativa Japonica Group aldose 1-epimerase (LOC4336039), mRNA aldose 1-epimerase(LOC4336039) coding protein psRNATarget