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BaseInfo

ncRNA ID	novel_zma_miR12904
Species	Zea mays
Class	miRNA
Genome position	Chr2:183686773-183686822 [-]
Reference genome	RefGen_v4
Source	SRR5451003
Length	24
Mature sequence(if miRNA)	27 - GCCCUGAGGCCGGACGGUUCGCGG - 50
Stem-loop(if miRNA)	--     G    -     G     C   GCCCU AGGC CGGAC GUUCG G   ||||| |||| ||||| ||||| G   CGGGG UCCG GCCUG CAGGU U GU     G    C     A     C
Stem-loop sequence	GCCCUGAGGCCGGACGGUUCGCGGUCUGGACAGUCCGCGCCUGGGGGCUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU940813.1	ncRNA:24   GGCGCUUGGCAGGCCGGAGUCCCG   1   |||||=|||||||||||||||||| targets:76   CCGCGGACCGUCCGGCCUCAGGGC   99 Target Full Sequence	1.0	Zea mays clone 1145688 mRNA sequence	NA	coding protein	psRNATarget
EU947355.1	ncRNA:24   GGCGCUUGGCAGGCCGGAGUCCCG   1   *||||=|||||||||||||||||| targets:86   GCGCGGACCGUCCGGCCUCAGGGC   109 Target Full Sequence	1.0	Zea mays clone 340715 mRNA sequence	NA	coding protein	psRNATarget
BT034345.1	ncRNA:24   GGCGCUUGGCAGGCCGGAGUCCCG   1   *||||=|||||||||||||||||| targets:751   GCGCGGACCGUCCGGCCUCAGGGC   774 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0009F02 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020550306.1	ncRNA:24   GGCGCUUGGCAGGCCGGAGUCCCG   1   *||||=|||||||||||||||||| targets:212   GCGCGGACCGUCCGGCCUCAGGGC   235 Target Full Sequence	1.0	PREDICTED: Zea mays enolase 1-like (LOC103650544), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008676122.2	ncRNA:24   GGCGCUUGGCAGGCCGGAGUCCCG   1   *||||=|||||||||||||||||| targets:212   GCGCGGACCGUCCGGCCUCAGGGC   235 Target Full Sequence	1.0	PREDICTED: Zea mays enolase 1-like (LOC103650544), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008676123.2	ncRNA:24   GGCGCUUGGCAGGCCGGAGUCCCG   1   *||||=|||||||||||||||||| targets:212   GCGCGGACCGUCCGGCCUCAGGGC   235 Target Full Sequence	1.0	PREDICTED: Zea mays enolase 1-like (LOC103650544), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008676121.2	ncRNA:24   GGCGCUUGGCAGGCCGGAGUCCCG   1   *||||=|||||||||||||||||| targets:212   GCGCGGACCGUCCGGCCUCAGGGC   235 Target Full Sequence	1.0	PREDICTED: Zea mays enolase 1-like (LOC103650544), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EZ059430.1	ncRNA:24   GGCGCUUGGCAGGCCGGAGUCCCG   1   |||||=||||||||||||||||*| targets:63   CCGCGGACCGUCCGGCCUCAGGCC   86 Target Full Sequence	2.5	TSA: Zea mays contig60552, mRNA sequence	NA	coding protein	psRNATarget
EZ061701.1	ncRNA:24   GGCGCUUGGCAGGCCGGAGUCCCG   1   *|*||=|||||||||||||||||| targets:200   GCACGGACCGUCCGGCCUCAGGGC   223 Target Full Sequence	1.0	TSA: Zea mays contig62823, mRNA sequence	NA	coding protein	psRNATarget