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BaseInfo

ncRNA ID novel_zma_miR12894
Species Zea mays
Class miRNA
Genome position Chr10:144997994-144998070 [-]
Reference genome RefGen_v4
Source SRR5451003
Length 22
Mature sequence(if miRNA) 1 - GGUGUCGGAUACCGUAUCGGAU - 22
Stem-loop(if miRNA) --       A  CG        UAU A       AUACUU
  CCGAUGC GU  CCGACGCC   G UGCGUGG      C
  ||||||| ||  ||||||||   | |||||||
  GGCUAUG CA  GGCUGUGG   C AUGCACU      U
UA       C  UA        --- C       CAAAGC
Stem-loop sequence CCGAUGCAGUCGCCGACGCCUAUGAUGCGUGGAUACUUCUCGAAACUCACGUACCGGUGUCGGAUACCGUAUCGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ075392.1
ncRNA:22   UAGGCUAUGCCAUAGGCUGUGG   1
  |||=||||||||||||||||||
targets:99   AUCUGAUACGGUAUCCGACACC   120

1.0 TSA: Zea mays contig11029, mRNA sequence NA coding protein psRNATarget
EU953239.1
ncRNA:22   UAGGCUAUGCCAUAGGCUGUGG   1
  |||||||||*||||||||||||
targets:1714   AUCCGAUACUGUAUCCGACACC   1735

1.5 Zea mays clone 1392858 mRNA sequence NA coding protein psRNATarget