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BaseInfo

ncRNA ID	novel_zma_miR12884
Species	Zea mays
Class	miRNA
Genome position	Chr10:148772961-148773092 [-]
Reference genome	RefGen_v4
Source	SRR5451003
Length	24
Mature sequence(if miRNA)	1 - CACUCCAAAACGAACAAGCCCUGA - 24
Stem-loop(if miRNA)	--                                                               A   AGGGCUUGUUCGUUUUGGAGUGGAUUGAGGGGGAUUGGAGGGGAUUAAAUCCCCUCCUAUACA A   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   UCCCGAACAAGCAAAACCUCACCUAACUCCCCCUAACCUCCCCUAAUUUAGGGGAGGAUAUGU U AG                                                               U
Stem-loop sequence	AGGGCUUGUUCGUUUUGGAGUGGAUUGAGGGGGAUUGGAGGGGAUUAAAUCCCCUCCUAUACAAAUUUGUAUAGGAGGGGAUUUAAUCCCCUCCAAUCCCCCUCAAUCCACUCCAAAACGAACAAGCCCUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008674273.2	ncRNA:24   AGUCCCGAACAAGCAAAACCUCAC   1   ||-||||||||||||||||||||| targets:2381   UC-GGGCUUGUUCGUUUUGGAGUG   2403 Target Full Sequence	0.0	PREDICTED: Zea mays DNA replication licensing factor MCM7 (cl18116_1), transcript variant X1, mRNA	NA	coding protein	psRNATarget
JB163433.1	ncRNA:24   AGUCCCGAACAAGCAAAACCUCAC   1   *=||||||||||||||||||||*| targets:42   CUAGGGCUUGUUCGUUUUGGAGNG   65 Target Full Sequence	1.5	Sequence 1097 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235102.1	ncRNA:24   AGUCCCGAACAAGCAAAACCUCAC   1   *=||||||||||||||||||||*| targets:42   CUAGGGCUUGUUCGUUUUGGAGNG   65 Target Full Sequence	1.5	Sequence 1097 from Patent EP2985353	NA	coding protein	psRNATarget
HI402972.1	ncRNA:24   AGUCCCGAACAAGCAAAACCUCAC   1   *=||||||||||||||||||||*| targets:42   CUAGGGCUUGUUCGUUUUGGAGNG   65 Target Full Sequence	1.5	Sequence 1097 from Patent EP2074227	NA	coding protein	psRNATarget
EZ062166.1	ncRNA:24   AGUCCCGAACAAGCAAAACCUCAC   1   *=||||||*||||||*|||||||| targets:164   AUAGGGCUCGUUCGUCUUGGAGUG   187 Target Full Sequence	2.5	TSA: Zea mays contig63288, mRNA sequence	NA	coding protein	psRNATarget
BT041973.1	ncRNA:24   AGUCCCGAACAAGCAAAACCUCAC   1   *=||||||*||||||*|||||||| targets:1875   AUAGGGCUCGUUCGUCUUGGAGUG   1898 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0092L07 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148275.1	ncRNA:24   AGUCCCGAACAAGCAAAACCUCAC   1   *=||||||*||||||*|||||||| targets:1875   AUAGGGCUCGUUCGUCUUGGAGUG   1898 Target Full Sequence	2.5	Zea mays uncharacterized LOC100273881 (LOC100273881), mRNA	NA	coding protein	psRNATarget