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BaseInfo

ncRNA ID novel_zma_miR12883
Species Zea mays
Class miRNA
Genome position Chr2:163889838-163889886 [+]
Reference genome RefGen_v4
Source SRR5451003
Length 22
Mature sequence(if miRNA) 28 - AUGGUGUAGUGGAGAGGAAGAU - 49
Stem-loop(if miRNA) -   -       -  AC      CAA
 UCU CUUCUCC CU  ACACCA   C
 ||| ||||||| ||  ||||||
 AGA GGAGAGG GA  UGUGGU   A
U   A       U  --      AAA
Stem-loop sequence UCUCUUCUCCCUACACACCACAACAAAAUGGUGUAGUGGAGAGGAAGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ241420.1
ncRNA:22   UAGAAGGAGAGGUGAUGUGGUA   1
  *|||||||||||||||||||||
targets:18   UUCUUCCUCUCCACUACACCAU   39

0.0 Sequence 7415 from Patent EP2985353 NA coding protein psRNATarget
HI409290.1
ncRNA:22   UAGAAGGAGAGGUGAUGUGGUA   1
  *|||||||||||||||||||||
targets:18   UUCUUCCUCUCCACUACACCAU   39

0.0 Sequence 7415 from Patent EP2074227 NA coding protein psRNATarget
JB169751.1
ncRNA:22   UAGAAGGAGAGGUGAUGUGGUA   1
  *|||||||||||||||||||||
targets:18   UUCUUCCUCUCCACUACACCAU   39

0.0 Sequence 7415 from Patent EP2559767 NA coding protein psRNATarget