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BaseInfo

ncRNA ID novel_zma_miR12878
Species Zea mays
Class miRNA
Genome position Chr2:118162839-118162892 [+]
Reference genome RefGen_v4
Source SRR5451003
Length 24
Mature sequence(if miRNA) 31 - CUGUUUAUGUGACUGUAGAUGGGC - 54
Stem-loop(if miRNA) UAGG    -    UG  C       CC
    GUUU CAGU  CA UGGACGG  A
    |||| ||||  || |||||||
    UAGA GUCA  GU AUUUGUC  C
CGGG    U    GU  -       AC
Stem-loop sequence UAGGGUUUCAGUUGCACUGGACGGCCACCACUGUUUAUGUGACUGUAGAUGGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT086844.1
ncRNA:24   CG-GGUAGA---UGUCAGUGUAUUUGUC   1
  ||-=|||||---||||||||||||||||
targets:140   GCAUCAUCUCUUACAGUCACAUAAACAG   167

3.0 Zea mays full-length cDNA clone ZM_BFa0074D16 mRNA, complete cds NA coding protein psRNATarget