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BaseInfo

ncRNA ID	novel_zma_miR12876
Species	Zea mays
Class	miRNA
Genome position	Chr2:97615576-97615689 [+]
Reference genome	RefGen_v4
Source	SRR5451003;SRR2089703
Length	24
Mature sequence(if miRNA)	91 - AGCGGGAUGGGAACGGAGCGGCUU - 114
Stem-loop(if miRNA)	--             --GU    GGUAAUCUGGAACGGAGUGACUCUGUUUUUUGUUU   GCCGCUCUGUUCC    GUUU                                   G   |||||||||||||    ||||   CGGCGAGGCAAGG    GGCG                                   G UU             GUAG    AGAGUGUCAGUGCGAGGCGAGGCAAGUGAGACGUU
Stem-loop sequence	GCCGCUCUGUUCCGUGUUUGGUAAUCUGGAACGGAGUGACUCUGUUUUUUGUUUGGUUGCAGAGUGAACGGAGCGGAGCGUGACUGUGAGAGCGGGAUGGGAACGGAGCGGCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020542520.1	ncRNA:24   UUCGGCGAGGCAAGGGUAGGGCGA   1   =|||||||||||||=||||||||| targets:1627   GAGCCGCUCCGUUCUCAUCCCGCU   1650 Target Full Sequence	1.5	PREDICTED: Zea mays putative ubiquitin-conjugating enzyme E2 38 (LOC100502147), transcript variant X2, mRNA	NA	coding protein	psRNATarget
AY111106.1	ncRNA:24   UUCGGCGAGGCAAGGGUAGGGCGA   1   =||||||||||||||||*|||||| targets:318   GAGCCGCUCCGUUCCCAGCCCGCU   341 Target Full Sequence	1.5	Zea mays CL29481_1 mRNA sequence	NA	coding protein	psRNATarget
XM_008670002.2	ncRNA:24   UUCGGCG-AGGCAAGGGUAGGGCGA   1   |**||||-||||||||||||||||* targets:269   ACUCCGCCUCCGUUCCCAUCCCGCG   293 Target Full Sequence	3.0	PREDICTED: Zea mays argonaute1c (LOC100304327), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008654817.2	ncRNA:24   UUCGGCGAGGCAAGGGUAGGGCGA   1   *|*|||||||||||||*||||||* targets:366   UACCCGCUCCGUUCCCCUCCCGCC   389 Target Full Sequence	2.5	PREDICTED: Zea mays Fanconi anemia group J protein homolog (LOC103633141), mRNA	NA	coding protein	psRNATarget