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BaseInfo

ncRNA ID	novel_zma_miR12872
Species	Zea mays
Class	miRNA
Genome position	Chr1:35233244-35233323 [-]
Reference genome	RefGen_v4
Source	SRR5451003
Length	24
Mature sequence(if miRNA)	1 - AAUCCAUGAUUUGUAGUGACGGUU - 24
Stem-loop(if miRNA)	--         A       -U    C  C          U   CCGUCACUA AAAUCAU  AUUU UA AGGCGGUUUU U   ||||||||| |||||||  |||| || |||||||||| A   GGCAGUGAU UUUAGUA  UAAA AU UCCGCUAAAA A UU         G       CC    A  A          C
Stem-loop sequence	CCGUCACUAAAAAUCAUUAUUUCUACAGGCGGUUUUUUAACAAAAUCGCCUAUAAAAAUCCAUGAUUUGUAGUGACGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163473.1	ncRNA:24   UUGGCAGUGAUGUUUAGUACCUAA   1   |||||||||||||||||||||||| targets:35   AACCGUCACUACAAAUCAUGGAUU   58 Target Full Sequence	0.0	Sequence 1137 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235142.1	ncRNA:24   UUGGCAGUGAUGUUUAGUACCUAA   1   |||||||||||||||||||||||| targets:35   AACCGUCACUACAAAUCAUGGAUU   58 Target Full Sequence	0.0	Sequence 1137 from Patent EP2985353	NA	coding protein	psRNATarget
HI403012.1	ncRNA:24   UUGGCAGUGAUGUUUAGUACCUAA   1   |||||||||||||||||||||||| targets:35   AACCGUCACUACAAAUCAUGGAUU   58 Target Full Sequence	0.0	Sequence 1137 from Patent EP2074227	NA	coding protein	psRNATarget
HI403085.1	ncRNA:24   UUGGCAGUGAUGUUUAGUACCUAA   1   |||||*|||||*|||||||||||| targets:17   AACCGCCACUAGAAAUCAUGGAUU   40 Target Full Sequence	2.5	Sequence 1210 from Patent EP2074227	NA	coding protein	psRNATarget
JB163546.1	ncRNA:24   UUGGCAGUGAUGUUUAGUACCUAA   1   |||||*|||||*|||||||||||| targets:17   AACCGCCACUAGAAAUCAUGGAUU   40 Target Full Sequence	2.5	Sequence 1210 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235215.1	ncRNA:24   UUGGCAGUGAUGUUUAGUACCUAA   1   |||||*|||||*|||||||||||| targets:17   AACCGCCACUAGAAAUCAUGGAUU   40 Target Full Sequence	2.5	Sequence 1210 from Patent EP2985353	NA	coding protein	psRNATarget