ncRNA ID | novel_zma_miR12870 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:227251104-227251303 [+] |
Reference genome | RefGen_v4 |
Source | SRR1997866 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGGAUGUACUUUUUUGCCCAC - 21 |
Stem-loop(if miRNA) |
--                  C       C  U       --     -----    C       A    A U                U         AUUUUC   UGGAUGUACUUUUUUGCC ACUCUAC AU GUAUAAA  UUUAA     AAUU ACCAUAU UUAA A AUACAAAAAGAGAAAA UCUGAGAUA      A   |||||||||||||||||| ||||||| || |||||||  |||||     |||| ||||||| |||| | |||||||||||||||| |||||||||      C   AUCUACAUGAAAGAACGG UGAGAUG UG CAUAUUU  AAAUU     UUAA UGGUAUA AAUU U UAUGUUUUUCUCUUUU AGAUUCUAU      U AU                  A       U  U       UA     CAAAU    C       C    A C                U         GUUUUU |
Stem-loop sequence | UGGAUGUACUUUUUUGCCCACUCUACCAUUGUAUAAAUUUAAAAUUCACCAUAUAUUAAAAUAUACAAAAAGAGAAAAUUCUGAGAUAAUUUUCACUUUUUUGUAUCUUAGAUUUUUCUCUUUUUGUAUCUAUUAACAUAUGGUCAAUUUAAACUUAAAAUUUUAUACUGUUGUAGAGUAGGCAAGAAAGUACAUCUAUA |