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BaseInfo

ncRNA ID novel_zma_miR12870
Species Zea mays
Class miRNA
Genome position Chr2:227251104-227251303 [+]
Reference genome RefGen_v4
Source SRR1997866
Length 21
Mature sequence(if miRNA) 1 - UGGAUGUACUUUUUUGCCCAC - 21
Stem-loop(if miRNA) --                  C       C  U       --     -----    C       A    A U                U         AUUUUC
  UGGAUGUACUUUUUUGCC ACUCUAC AU GUAUAAA  UUUAA     AAUU ACCAUAU UUAA A AUACAAAAAGAGAAAA UCUGAGAUA      A
  |||||||||||||||||| ||||||| || |||||||  |||||     |||| ||||||| |||| | |||||||||||||||| |||||||||      C
  AUCUACAUGAAAGAACGG UGAGAUG UG CAUAUUU  AAAUU     UUAA UGGUAUA AAUU U UAUGUUUUUCUCUUUU AGAUUCUAU      U
AU                  A       U  U       UA     CAAAU    C       C    A C                U         GUUUUU
Stem-loop sequence UGGAUGUACUUUUUUGCCCACUCUACCAUUGUAUAAAUUUAAAAUUCACCAUAUAUUAAAAUAUACAAAAAGAGAAAAUUCUGAGAUAAUUUUCACUUUUUUGUAUCUUAGAUUUUUCUCUUUUUGUAUCUAUUAACAUAUGGUCAAUUUAAACUUAAAAUUUUAUACUGUUGUAGAGUAGGCAAGAAAGUACAUCUAUA