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BaseInfo

ncRNA ID novel_zma_miR12866
Species Zea mays
Class miRNA
Genome position Chr1:73688449-73688526 [-]
Reference genome RefGen_v4
Source SRR5451003
Length 24
Mature sequence(if miRNA) 55 - AGCACCUCCCCGCUGUUCUCUGGA - 78
Stem-loop(if miRNA) -A -        C C            ---    -G    G
  G CACCUCCC G UGUUCUCUGGAU   ACAC  UCCU G
  | |||||||| | ||||||||||||   ||||  ||||
  C GUGGAGGG C ACAAGAGACCUG   UGUG  AGGG C
CG A        A A            UCA    AG    A
Stem-loop sequence AGCACCUCCCCGCUGUUCUCUGGAUACACGUCCUGGCAGGGAGAGUGUACUGUCCAGAGAACAACAGGGAGGUGACGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB166410.1
ncRNA:24   AGGUCUCUUGUCGCCCCUCCACGA   1
  |||=||||||||||||||||||||
targets:67   UCCGGAGAACAGCGGGGAGGUGCU   90

0.0 Sequence 4074 from Patent EP2559767 NA coding protein psRNATarget
HI405949.1
ncRNA:24   AGGUCUCUUGUCGCCCCUCCACGA   1
  |||=||||||||||||||||||||
targets:67   UCCGGAGAACAGCGGGGAGGUGCU   90

0.0 Sequence 4074 from Patent EP2074227 NA coding protein psRNATarget
LQ238079.1
ncRNA:24   AGGUCUCUUGUCGCCCCUCCACGA   1
  |||=||||||||||||||||||||
targets:67   UCCGGAGAACAGCGGGGAGGUGCU   90

0.0 Sequence 4074 from Patent EP2985353 NA coding protein psRNATarget