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BaseInfo

ncRNA ID novel_zma_miR12861
Species Zea mays
Class miRNA
Genome position Chr1:122667768-122667830 [-]
Reference genome RefGen_v4
Source SRR5451003;SRR5451004
Length 24
Mature sequence(if miRNA) 1 - AAUGAACUUCGGACGAAGGGCAUG - 24
Stem-loop(if miRNA) --            AUU    --    AUCU   
  UGCCCUUCGUCC   GAAG  CAUU    CCCC
  ||||||||||||   ||||  ||||    |||A
  ACGGGAAGCAGG   CUUC  GUAA    GGGA
GU            ---    AA    -CAU   
Stem-loop sequence UGCCCUUCGUCCAUUGAAGCAUUAUCUCCCCAAGGGUACAAUGAACUUCGGACGAAGGGCAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU970085.1
ncRNA:24   GUACGGGAAGCAGGCUUCAAGUAA   1
  =||**||||||||||||||*|||*
targets:635   UAUAACCUUCGUCCGAAGUACAUC   658

2.5 Zea mays clone 339510 mRNA sequence NA coding protein psRNATarget