ncRNA ID | novel_zma_miR12844 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:272716599-272716785 [+] |
Reference genome | RefGen_v4 |
Source | SRR5451003;SRR5451005;SRR5451006 |
Length | 24 |
Mature sequence(if miRNA) | 164 - CAUGUAGGAAAAGUUGGCGCCAAU - 187 |
Stem-loop(if miRNA) |
--                                         C                                     CUU  CGGUGGGG   UGGCGCCAACUUUUCCUACGUGGCAGCCGAUGUGGCAAGUC CAGGGGGUCGGCGCCAUAGAUCUUGGCGCCGACCCCC   GA        U   ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   ||        C   ACCGCGGUUGAAAAGGAUGUACCGUCGGCUAUACCGUUCAG GUCCCCCAGCCGCGGUAUCUAGAACCGCGGCUGGGGG   CC        C UA                                         A                                     --A  UAUCGUGG |
Stem-loop sequence | UGGCGCCAACUUUUCCUACGUGGCAGCCGAUGUGGCAAGUCCCAGGGGGUCGGCGCCAUAGAUCUUGGCGCCGACCCCCCUUGACGGUGGGGUCCGGUGCUAUCCAGGGGGUCGGCGCCAAGAUCUAUGGCGCCGACCCCCUGAGACUUGCCAUAUCGGCUGCCAUGUAGGAAAAGUUGGCGCCAAU |