ncRNA ID | novel_zma_miR12838 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:8783898-8783951 [+] |
Reference genome | RefGen_v4 |
Source | SRR5451003 |
Length | 24 |
Mature sequence(if miRNA) | 31 - GGGCUUCGUGCCGGGCUCGCGGAC - 54 |
Stem-loop(if miRNA) |
-CG  U         -  CG     AA    UG CGGGCUCGG AC  GGCCC  A    || ||||||||| ||  |||||  C    GC GCUCGGGCC UG  UCGGG  A CAG  -         G  CU     CG |
Stem-loop sequence | CGUGUCGGGCUCGGACCGGGCCCAAACAGCGGGCUUCGUGCCGGGCUCGCGGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008671112.2 |
|
0.0 | PREDICTED: Zea mays uncharacterized LOC103646381 (LOC103646381), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020545884.1 |
|
1.5 | PREDICTED: Zea mays E3 ubiquitin-protein ligase PUB23 (LOC103642284), mRNA | NA | coding protein | psRNATarget |