Search result

BaseInfo

ncRNA ID novel_zma_miR12837
Species Zea mays
Class miRNA
Genome position Chr9:49935414-49935485 [+]
Reference genome RefGen_v4
Source SRR5451003;SRR5451005
Length 22
Mature sequence(if miRNA) 51 - ACUUAAGUUGGAAUAAAUCGGG - 72
Stem-loop(if miRNA) --  UG       U          ---     A   U
  CG  UUAUUCC AUUUAAGUGU   GGUCU GCC C
  ||  ||||||| ||||||||||   ||||| ||| C
  GC  AAUAAGG UGAAUUCACG   UCAGG UGG A
GG  UA       U          UAU     G   A
Stem-loop sequence CGUGUUAUUCCUAUUUAAGUGUGGUCUAGCCUCCAAGGUGGGACUUAUGCACUUAAGUUGGAAUAAAUCGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT084202.2
ncRNA:22   GGGCUAAAUAAGGUUGAAUUCA   1
  |||*|*||||||||||||||||
targets:346   CCCAAAUUAUUCCAACUUAAGU   367

2.0 Zea mays full-length cDNA clone ZM_BFb0088N15 mRNA, complete cds NA coding protein psRNATarget