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BaseInfo

ncRNA ID	novel_zma_miR12831
Species	Zea mays
Class	miRNA
Genome position	Chr9:30439503-30439564 [-]
Reference genome	RefGen_v4
Source	SRR5451003
Length	24
Mature sequence(if miRNA)	39 - AUAGCACUCGGCAAAGAAGGAACA - 62
Stem-loop(if miRNA)	--                   GAAC   U G   AUAGCACUCGGCAAAGAAG    ACU G G   |||||||||||||||||||    ||| |   UAUCGUGAGCCGUUUCUUU    UGG C C GG                   GAAA   C A
Stem-loop sequence	AUAGCACUCGGCAAAGAAGGAACACUUGGGCACCGGUAAAGUUUCUUUGCCGAGUGCUAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI407067.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   *|*|=|*||||||||||||||||| targets:10   AGAUUCGUCUUUGCCGAGUGCUAU   33 Target Full Sequence	1.0	Sequence 5192 from Patent EP2074227	NA	coding protein	psRNATarget
JB167528.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   *|*|=|*||||||||||||||||| targets:10   AGAUUCGUCUUUGCCGAGUGCUAU   33 Target Full Sequence	1.0	Sequence 5192 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239197.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   *|*|=|*||||||||||||||||| targets:10   AGAUUCGUCUUUGCCGAGUGCUAU   33 Target Full Sequence	1.0	Sequence 5192 from Patent EP2985353	NA	coding protein	psRNATarget
HI406772.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   ||--|||||||||||||||*|||| targets:96   UG--CCUUCUUUGCCGAGUACUAU   117 Target Full Sequence	1.5	Sequence 4897 from Patent EP2074227	NA	coding protein	psRNATarget
JB167233.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   ||--|||||||||||||||*|||| targets:96   UG--CCUUCUUUGCCGAGUACUAU   117 Target Full Sequence	1.5	Sequence 4897 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238902.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   ||--|||||||||||||||*|||| targets:96   UG--CCUUCUUUGCCGAGUACUAU   117 Target Full Sequence	1.5	Sequence 4897 from Patent EP2985353	NA	coding protein	psRNATarget
HI407068.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   *|****||||||||||||||||=| targets:44   GGCGGAUUCUUUGCCGAGUGCUGU   67 Target Full Sequence	2.5	Sequence 5193 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239198.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   *|****||||||||||||||||=| targets:44   GGCGGAUUCUUUGCCGAGUGCUGU   67 Target Full Sequence	2.5	Sequence 5193 from Patent EP2985353	NA	coding protein	psRNATarget
JB167529.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   *|****||||||||||||||||=| targets:44   GGCGGAUUCUUUGCCGAGUGCUGU   67 Target Full Sequence	2.5	Sequence 5193 from Patent EP2559767	NA	coding protein	psRNATarget
JB169026.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   **|***||||||||||||||=||| targets:1   CUUAGGUUCUUUGCCGAGUGUUAU   24 Target Full Sequence	2.5	Sequence 6690 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240695.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   **|***||||||||||||||=||| targets:1   CUUAGGUUCUUUGCCGAGUGUUAU   24 Target Full Sequence	2.5	Sequence 6690 from Patent EP2985353	NA	coding protein	psRNATarget
HI408565.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   **|***||||||||||||||=||| targets:1   CUUAGGUUCUUUGCCGAGUGUUAU   24 Target Full Sequence	2.5	Sequence 6690 from Patent EP2074227	NA	coding protein	psRNATarget
HI409785.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   ******|||||||||||||||||* targets:76   GUGAGGUUCUUUGCCGAGUGCUAC   99 Target Full Sequence	2.0	Sequence 7910 from Patent EP2074227	NA	coding protein	psRNATarget
JB170246.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   ******|||||||||||||||||* targets:76   GUGAGGUUCUUUGCCGAGUGCUAC   99 Target Full Sequence	2.0	Sequence 7910 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241915.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   ******|||||||||||||||||* targets:76   GUGAGGUUCUUUGCCGAGUGCUAC   99 Target Full Sequence	2.0	Sequence 7910 from Patent EP2985353	NA	coding protein	psRNATarget
LQ238769.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   ***|*||||||||||||||||*|| targets:163   GCGUGCUUCUUUGCCGAGUGCCAU   186 Target Full Sequence	1.5	Sequence 4764 from Patent EP2985353	NA	coding protein	psRNATarget
JB167100.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   ***|*||||||||||||||||*|| targets:163   GCGUGCUUCUUUGCCGAGUGCCAU   186 Target Full Sequence	1.5	Sequence 4764 from Patent EP2559767	NA	coding protein	psRNATarget
HI406639.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   ***|*||||||||||||||||*|| targets:163   GCGUGCUUCUUUGCCGAGUGCCAU   186 Target Full Sequence	1.5	Sequence 4764 from Patent EP2074227	NA	coding protein	psRNATarget
HI406743.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   |****|||||||*||||||||||| targets:40   UAAAGCUUCUUUACCGAGUGCUAU   63 Target Full Sequence	1.5	Sequence 4868 from Patent EP2074227	NA	coding protein	psRNATarget
JB167204.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   |****|||||||*||||||||||| targets:40   UAAAGCUUCUUUACCGAGUGCUAU   63 Target Full Sequence	1.5	Sequence 4868 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238873.1	ncRNA:24   ACAAGGAAGAAACGGCUCACGAUA   1   |****|||||||*||||||||||| targets:40   UAAAGCUUCUUUACCGAGUGCUAU   63 Target Full Sequence	1.5	Sequence 4868 from Patent EP2985353	NA	coding protein	psRNATarget