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BaseInfo

ncRNA ID ath-miRf10136-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - UACUCGACCUGUUGGUCGAGUGG - NA
Stem-loop(if miRNA) - GA G         UC     A    -     G    --------AGUGG UG  UGAUGAUGGAGGUGAAGACACUCGUCCUCAUGGUCGAGUGAAGUGA
 G  G UACUCGACC  UAGGU GAGU GAGGA GUCG             U  UC                                              U
 |  | |||||||||  ||||| |||| ||||| ||||             |  ||                                              C
 C  U GUGAGCUGG  GUCCA CUCA CUCCU UAGU             G  UG                                              G
U UC G         UU     G    U     G    GGUUAAGUUGGUG --  AGCUGGGGCUCCAGCUCACGGUAGUAGAGUAGUGGUCUGUCAGUGA
Stem-loop sequence GGAGGUACUCGACCUCUAGGUAGAGUGAGGAGGUCGAGUGGUUGUCUGAUGAUGGAGGUGAAGACACUCGUCCUCAUGGUCGAGUGAAGUGAUCGAGUGACUGUCUGGUGAUGAGAUGAUGGCACUCGACCUCGGGGUCGAGUGGUGGUUGAAUUGGUGAUGUCCUCUACUCGACCUGUUGGUCGAGUGGUCUCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT012022.1
ncRNA:23   GGUGAGCUGGUUGUCCAGCUCAU   1
  =|||||*||||||||||||||||
targets:34   UCACUCUACCAACAGGUCGAGUA   56

1.0 Arabidopsis thaliana At2g10890 mRNA sequence NA coding protein psRNATarget
DQ069808.1
ncRNA:23   GGUGAGCUGGUUGUCCAGCUCAU   1
  =|||||*||||||||||||||||
targets:145   UCACUCUACCAACAGGUCGAGUA   167

1.0 Arabidopsis thaliana At2g10880 mRNA, partial sequence NA coding protein psRNATarget
EF183192.1
ncRNA:23   GGUGAGCUGGUUGUCCAGCUCAU   1
  =|||||*||||||||||||||||
targets:317   UCACUCUACCAACAGGUCGAGUA   339

1.0 Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence NA coding protein psRNATarget
EF183192.1
ncRNA:23   GGUGAGCUGGUUGUCCAGCUCAU   1
  =|||||*||||||||||||||||
targets:365   UCACUCUACCAACAGGUCGAGUA   387

1.0 Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence NA coding protein psRNATarget
EF183192.1
ncRNA:23   GGUGAGCUGGUUGUCCAGCUCAU   1
  =|||||*||||||||||||||||
targets:413   UCACUCUACCAACAGGUCGAGUA   435

1.0 Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence NA coding protein psRNATarget
EF183193.1
ncRNA:23   GGUGAGCUGGUUGUCCAGCUCAU   1
  =|||||*||||||||||||||||
targets:692   UCACUCUACCAACAGGUCGAGUA   714

1.0 Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence NA coding protein psRNATarget
EF183193.1
ncRNA:23   GGUGAGCUGGUUGUCCAGCUCAU   1
  =|||||*||||||||||||||||
targets:740   UCACUCUACCAACAGGUCGAGUA   762

1.0 Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence NA coding protein psRNATarget
EF183193.1
ncRNA:23   GGUGAGCUGGUUGUCCAGCUCAU   1
  =|||||*||||||||||||||||
targets:788   UCACUCUACCAACAGGUCGAGUA   810

1.0 Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence NA coding protein psRNATarget
EF183191.1
ncRNA:23   GGUGAGCUGGUUGUCCAGCUCAU   1
  =|||||*||||||||||||||||
targets:692   UCACUCUACCAACAGGUCGAGUA   714

1.0 Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence NA coding protein psRNATarget
EF183191.1
ncRNA:23   GGUGAGCUGGUUGUCCAGCUCAU   1
  =|||||*||||||||||||||||
targets:740   UCACUCUACCAACAGGUCGAGUA   762

1.0 Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence NA coding protein psRNATarget
EF183191.1
ncRNA:23   GGUGAGCUGGUUGUCCAGCUCAU   1
  =|||||*||||||||||||||||
targets:788   UCACUCUACCAACAGGUCGAGUA   810

1.0 Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence NA coding protein psRNATarget
EF183194.1
ncRNA:23   GGUGAGCUGGUUGUCCAGCUCAU   1
  |||||||||||*|||||||||||
targets:449   CCACUCGACCACCAGGUCGAGUA   471

1.5 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
EF183194.1
ncRNA:23   GGUGAGCUGGUUGUCCAGCUCAU   1
  =|||||*|||||*||||||||||
targets:575   UCACUCUACCAAGAGGUCGAGUA   597

2.5 Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence NA coding protein psRNATarget
AY227642.1
ncRNA:23   GGUGAGCUGGUUGUCCAGCUCAU   1
  |||||||||*|*|||||||||||
targets:808   CCACUCGACAACCAGGUCGAGUA   830

2.5 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget