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BaseInfo

ncRNA ID osa-miRf10879-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 24
Mature sequence(if miRNA) NA - UCAGCGCCAUGCUAUUUGGCGCUG - NA
Stem-loop(if miRNA)                  C  CAAC            -----   - - CCAACGCGGAUG
UAGACACUUCAGCGCCA GU    UGGCGCUGAAUG     CUG U G            G
||||||||||||||||| ||    ||||||||||||     ||| | |
AUCUGUGGAGUCGCGGU UA    ACCGCGACUUAC     ACC U U            A
                 U  UCGU            AUGCA   G G GAUUGAGUCGGA
Stem-loop sequence UAGACACUUCAGCGCCACGUCAACUGGCGCUGAAUGCUGUGCCAACGCGGAUGGAAGGCUGAGUUAGUGUGCCAACGUACAUUCAGCGCCAUGCUAUUUGGCGCUGAGGUGUCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015766258.1
ncRNA:24   GUCGCGGUUUAUCGUACCGCGACU   1
  |||||||||||||=||||||||||
targets:1120   CAGCGCCAAAUAGUAUGGCGCUGA   1143

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9269164 (LOC9269164), mRNA uncharacterized LOC9269164(LOC9269164) coding protein psRNATarget
AK105004.2
ncRNA:24   GUCGCGGUUUAUCGUACCGCGACU   1
  |||||||||||||=||||||||||
targets:295   CAGCGCCAAAUAGUAUGGCGCUGA   318

1.5 Oryza sativa Japonica Group cDNA clone:001-006-B03, full insert sequence NA coding protein psRNATarget
XM_015770637.1
ncRNA:24   GUCGCGGUUUAUCGUACCGCGACU   1
  |||||*||||||||||||||||||
targets:413   CAGCGGCAAAUAGCAUGGCGCUGA   436

1.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X1, mRNA uncharacterized LOC4329649(LOC4329649) coding protein psRNATarget
XM_015770638.1
ncRNA:24   GUCGCGGUUUAUCGUACCGCGACU   1
  |||||*||||||||||||||||||
targets:413   CAGCGGCAAAUAGCAUGGCGCUGA   436

1.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329649 (LOC4329649), transcript variant X2, mRNA uncharacterized LOC4329649(LOC4329649) coding protein psRNATarget