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BaseInfo

ncRNA ID novel_zma_miR12807
Species Zea mays
Class miRNA
Genome position Chr1:181401619-181401694 [+]
Reference genome RefGen_v4
Source SRR5451003;SRR5451005
Length 22
Mature sequence(if miRNA) 55 - UUAAGUUGGAAUAAAUCGGGCA - 76
Stem-loop(if miRNA) --GA  GG       C          ---     A  CU
    CG  UUAUUCC AUUUAAGUGU   GGUCU GC  U
    ||  ||||||| ||||||||||   ||||| ||  U
    GC  AAUAAGG UGAAUUCACA   UCAGG CG  A
ACGG  UA       U          GAC     A  AA
Stem-loop sequence GACGGGUUAUUCCCAUUUAAGUGUGGUCUAGCCUUUAAAGCAGGACUCAGACACUUAAGUUGGAAUAAAUCGGGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT084202.2
ncRNA:22   ACGGGCUAAAUAAGGUUGAAUU   1
  |||||*|*||||||||||||||
targets:344   UGCCCAAAUUAUUCCAACUUAA   365

2.0 Zea mays full-length cDNA clone ZM_BFb0088N15 mRNA, complete cds NA coding protein psRNATarget