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BaseInfo

ncRNA ID	novel_zma_miR12803
Species	Zea mays
Class	miRNA
Genome position	Chr9:82688766-82688835 [+]
Reference genome	RefGen_v4
Source	SRR5451003
Length	24
Mature sequence(if miRNA)	1 - GAUCCCAGGAGGAUUGGAGGGGAU - 24
Stem-loop(if miRNA)	--      A         G     AUU        AA   GAUCCC GGAGGAUUG AGGGG   GAAGUGGA  U   |||||| ||||||||| |||||   ||||||||   CUAGGG CCUCCUAAC UCCCC   CUUUAUUU  U CC      C         -     ---        GA
Stem-loop sequence	GAUCCCAGGAGGAUUGGAGGGGAUUGAAGUGGAAAUUAGUUUAUUUCCCCCUCAAUCCUCCCGGGAUCCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI403018.1	ncRNA:24   UAGGGGAGGUUAGGAGGACCCUAG   1   |||||||||=|||||||||||||| targets:63   AUCCCCUCCGAUCCUCCUGGGAUC   86 Target Full Sequence	1.0	Sequence 1143 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235148.1	ncRNA:24   UAGGGGAGGUUAGGAGGACCCUAG   1   |||||||||=|||||||||||||| targets:63   AUCCCCUCCGAUCCUCCUGGGAUC   86 Target Full Sequence	1.0	Sequence 1143 from Patent EP2985353	NA	coding protein	psRNATarget
JB163479.1	ncRNA:24   UAGGGGAGGUUAGGAGGACCCUAG   1   |||||||||=|||||||||||||| targets:63   AUCCCCUCCGAUCCUCCUGGGAUC   86 Target Full Sequence	1.0	Sequence 1143 from Patent EP2559767	NA	coding protein	psRNATarget
LQ241793.1	ncRNA:24   UAGGGGAGGUUAGGAGGACCCUAG   1   |||||||=|||||||||*|||||| targets:76   AUCCCCUUCAAUCCUCCCGGGAUC   99 Target Full Sequence	2.5	Sequence 7788 from Patent EP2985353	NA	coding protein	psRNATarget
HI409663.1	ncRNA:24   UAGGGGAGGUUAGGAGGACCCUAG   1   |||||||=|||||||||*|||||| targets:76   AUCCCCUUCAAUCCUCCCGGGAUC   99 Target Full Sequence	2.5	Sequence 7788 from Patent EP2074227	NA	coding protein	psRNATarget
JB170124.1	ncRNA:24   UAGGGGAGGUUAGGAGGACCCUAG   1   |||||||=|||||||||*|||||| targets:76   AUCCCCUUCAAUCCUCCCGGGAUC   99 Target Full Sequence	2.5	Sequence 7788 from Patent EP2559767	NA	coding protein	psRNATarget
EU961132.1	ncRNA:24   UAGGGGAGGUUAGGAGGACCCUAG   1   |||||||=|||||||||*|||||| targets:830   AUCCCCUUCAAUCCUCCCGGGAUC   853 Target Full Sequence	2.5	Zea mays clone 232865 phospholipid hydroperoxide glutathione peroxidase mRNA, complete cds	NA	coding protein	psRNATarget
BT040716.2	ncRNA:24   UAGGGGAGGUUAGGAGGACCCUAG   1   |||||||=|||||||||*|||||| targets:869   AUCCCCUUCAAUCCUCCCGGGAUC   892 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0120F10 mRNA, complete cds	NA	coding protein	psRNATarget
BT066291.1	ncRNA:24   UAGGGGAGGUUAGGAGGACCCUAG   1   |||||||=|||||||||*|||||| targets:874   AUCCCCUUCAAUCCUCCCGGGAUC   897 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0176M03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147738.1	ncRNA:24   UAGGGGAGGUUAGGAGGACCCUAG   1   |||||||=|||||||||*|||||| targets:874   AUCCCCUUCAAUCCUCCCGGGAUC   897 Target Full Sequence	2.5	Zea mays putative glutathione peroxidase (LOC100273297), mRNA	NA	coding protein	psRNATarget
EU950017.1	ncRNA:24   UAGGGGAGGUUAGGAGGACCCUAG   1   |||=|||||=|||||||*|||||| targets:491   AUCUCCUCCGAUCCUCCCGGGAUC   514 Target Full Sequence	2.5	Zea mays clone 457681 mRNA sequence	NA	coding protein	psRNATarget