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BaseInfo

ncRNA ID novel_zma_miR12802
Species Zea mays
Class miRNA
Genome position Chr9:77568107-77568162 [+]
Reference genome RefGen_v4
Source SRR5451003;SRR5451005
Length 24
Mature sequence(if miRNA) 1 - UUCGAAUGAGGAGUAUGAGCGGAG - 24
Stem-loop(if miRNA) --   G            --   C    A
  UUC AAUGAGGAGUAU  GAG GGAG A
  ||| ||||||||||||  ||| |||| C
  GAG UUACUUCUCGUA  UUC CUUC U
GU   -            AA   A    U
Stem-loop sequence UUCGAAUGAGGAGUAUGAGCGGAGAACUUCUUCACUUAAAUGCUCUUCAUUGAGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020545883.1
ncRNA:24   GAGG---------CGAGUAUGAGGAGUAAGCUU   1
  ||||---------||||||||||||||||||*|
targets:680   CUCCAACCGGAUUGCUCAUACUCCUCAUUCGCA   712

1.5 PREDICTED: Zea mays uncharacterized LOC109943076 (LOC109943076), mRNA NA coding protein psRNATarget