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BaseInfo

ncRNA ID	novel_zma_miR12798
Species	Zea mays
Class	miRNA
Genome position	Chr2:174894075-174894198 [+]
Reference genome	RefGen_v4
Source	SRR1997866
Length	24
Mature sequence(if miRNA)	1 - AUGGGACCUUUGGCGACGAAGCAG - 24
Stem-loop(if miRNA)	--AUG            --A      ----------AG  CCCCAACAGUAGCCCCUUCACGGUGCCA      GGACCUUUGGCG   CGAAGC            AC                            G      ||||||||||||   ||||||            ||      CCUGGAAGCCGU   GCUUCG            AA                            A AAAAG            AAA      GACUCUCUCAAA  GUGUCCAGCUCGAGCAGUGCUUUUUGCU
Stem-loop sequence	AUGGGACCUUUGGCGACGAAGCAGACCCCCAACAGUAGCCCCUUCACGGUGCCAGAUCGUUUUUCGUGACGAGCUCGACCUGUGAAAAACUCUCUCAGGCUUCGAAAUGCCGAAGGUCCGAAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ084962.1	ncRNA:24   GACGAAGCAGCGGUUUCCAGGGUA   1   |||||||||||||=|||||||||| targets:7   CUGCUUCGUCGCCGAAGGUCCCAU   30 Target Full Sequence	1.5	TSA: Zea mays contig20606, mRNA sequence	NA	coding protein	psRNATarget
XM_020541164.1	ncRNA:24   GACGAAGCAGCGGUUUCCAGGGUA   1   |||||||||||||=|||||||||| targets:670   CUGCUUCGUCGCCGAAGGUCCCAU   693 Target Full Sequence	1.5	PREDICTED: Zea mays UDP-glycosyltransferase 91A1-like (LOC109940837), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541163.1	ncRNA:24   GACGAAGCAGCGGUUUCCAGGGUA   1   |||||||||||||=|||||||||| targets:653   CUGCUUCGUCGCCGAAGGUCCCAU   676 Target Full Sequence	1.5	PREDICTED: Zea mays UDP-glycosyltransferase 91A1-like (LOC109940837), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT087090.1	ncRNA:24   GACGAAGCAGCGGUUUCCAGGGUA   1   |||||||*|||||=|||||||||| targets:123   CUGCUUCAUCGCCGAAGGUCCCAU   146 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFa0068G11 mRNA, complete cds	NA	coding protein	psRNATarget
BT042382.1	ncRNA:24   GACGAAGCAGCGGUUUCCAGGGUA   1   ||*||||||||||=|||||||||| targets:1590   CUCCUUCGUCGCCGAAGGUCCCAU   1613 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0214I19 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148493.1	ncRNA:24   GACGAAGCAGCGGUUUCCAGGGUA   1   ||*||||||||||=|||||||||| targets:1590   CUCCUUCGUCGCCGAAGGUCCCAU   1613 Target Full Sequence	1.5	Zea mays Omega-hydroxypalmitate O-feruloyl transferase (LOC100274114), mRNA	NA	coding protein	psRNATarget