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BaseInfo

ncRNA ID osa-miRf10875-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - GUCACGUAGGCGCCACCUCAGU - NA
Stem-loop(if miRNA)             C                    C        GCCCACAUACACG      
UCCGGUUUUGGC GAGGUGGCGCCUACGUGGCU AUUUUGGC             CCAAUGA
|||||||||||| |||||||||||||||||||| ||||||||             ||||||C
AGGCCAAAAUUG CUCCACCGCGGAUGCACUGA UAAAAUUG             GGUUGCA
            A                    U        --AUCCAGAAACA      
Stem-loop sequence UCCGGUUUUGGCCGAGGUGGCGCCUACGUGGCUCAUUUUGGCGCCCACAUACACGCCAAUGACACGUUGGACAAAGACCUAGUUAAAAUUAGUCACGUAGGCGCCACCUCAGUUAAAACCGGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288481.1
ncRNA:22   UGACUCCACCGCGGAUGCACUG   1
  =||||*||||||||||||||=|
targets:539   GCUGACGUGGCGCCUACGUGGC   560

2.5 Oryza sativa Japonica Group cDNA, clone: J090039O20, full insert sequence NA coding protein psRNATarget
AK288176.1
ncRNA:22   UGACUCCACCGCGGAUGCACUG   1
  =||||*||||||||||||||=|
targets:2199   GCUGACGUGGCGCCUACGUGGC   2220

2.5 Oryza sativa Japonica Group cDNA, clone: J090004M07, full insert sequence NA coding protein psRNATarget
JB165002.1
ncRNA:22   UGACUCCACCGCGGAUGCACUG   1
  =||||**|||||||||||||||
targets:113   GCUGAUAUGGCGCCUACGUGAC   134

2.0 Sequence 2666 from Patent EP2559767 NA coding protein psRNATarget
HI404541.1
ncRNA:22   UGACUCCACCGCGGAUGCACUG   1
  =||||**|||||||||||||||
targets:113   GCUGAUAUGGCGCCUACGUGAC   134

2.0 Sequence 2666 from Patent EP2074227 NA coding protein psRNATarget
LQ236671.1
ncRNA:22   UGACUCCACCGCGGAUGCACUG   1
  =||||**|||||||||||||||
targets:113   GCUGAUAUGGCGCCUACGUGAC   134

2.0 Sequence 2666 from Patent EP2985353 NA coding protein psRNATarget
AK111490.1
ncRNA:22   UGACUCCACCGCGGAUGCACUG   1
  =|*||*||||||||||||||=|
targets:3765   GCCGACGUGGCGCCUACGUGGC   3786

2.5 Oryza sativa Japonica Group cDNA clone:J013000A19, full insert sequence NA coding protein psRNATarget