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BaseInfo

ncRNA ID novel_zma_miR12775
Species Zea mays
Class miRNA
Genome position Chr8:116611585-116611705 [+]
Reference genome RefGen_v4
Source SRR5451003;SRR5451004;SRR2089708
Length 24
Mature sequence(if miRNA) 98 - GUCUGUGUGGGUUGUCUGGGCGGC - 121
Stem-loop(if miRNA) -- A    AC   G  -          G       U GUGG  G      -AAACU    G  U
  C CUCG  CAG UC UAUGGGCCCA CCAGAGG G    CG UCGACG      UUGC GC A
  | ||||  ||| || |||||||||| ||||||| |    || ||||||      |||| ||
  G GGGU  GUU GG GUGUCUGGGU GGUCUCC C    GU AGCUGC      GACG UG U
CG C    CU   G  U          A       - ---A  -      GCGGCC    G  U
Stem-loop sequence CACUCGACCAGGUCUAUGGGCCCAGCCAGAGGUGGUGGCGGUCGACGAAACUUUGCGGCUAUUGUGGCAGCCGGCGCGUCGAUGACCCUCUGGAUGGGUCUGUGUGGGUUGUCUGGGCGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT056208.2
ncRNA:24   CGGCGGGUCUGUUGGGUGUGUCUG   1
  ||||||||||||||||||||||||
targets:754   GCCGCCCAGACAACCCACACAGAC   777

0.0 Zea mays full-length cDNA clone ZM_BFb0079I13 mRNA, complete cds NA coding protein psRNATarget
NM_001153348.1
ncRNA:24   CGGCGGGUCUGUUGGGUGUGUCUG   1
  ||||||||||||||||||||||||
targets:754   GCCGCCCAGACAACCCACACAGAC   777

0.0 Zea mays uncharacterized LOC100280425 (LOC100280425), mRNA NA coding protein psRNATarget