ncRNA ID | novel_zma_miR12775 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:116611585-116611705 [+] |
Reference genome | RefGen_v4 |
Source | SRR5451003;SRR5451004;SRR2089708 |
Length | 24 |
Mature sequence(if miRNA) | 98 - GUCUGUGUGGGUUGUCUGGGCGGC - 121 |
Stem-loop(if miRNA) |
-- A    AC   G  -          G       U GUGG  G      -AAACU    G  U   C CUCG  CAG UC UAUGGGCCCA CCAGAGG G    CG UCGACG      UUGC GC A   | ||||  ||| || |||||||||| ||||||| |    || ||||||      |||| ||   G GGGU  GUU GG GUGUCUGGGU GGUCUCC C    GU AGCUGC      GACG UG U CG C    CU   G  U          A       - ---A  -      GCGGCC    G  U |
Stem-loop sequence | CACUCGACCAGGUCUAUGGGCCCAGCCAGAGGUGGUGGCGGUCGACGAAACUUUGCGGCUAUUGUGGCAGCCGGCGCGUCGAUGACCCUCUGGAUGGGUCUGUGUGGGUUGUCUGGGCGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT056208.2 |
|
0.0 | Zea mays full-length cDNA clone ZM_BFb0079I13 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001153348.1 |
|
0.0 | Zea mays uncharacterized LOC100280425 (LOC100280425), mRNA | NA | coding protein | psRNATarget |