Search result

BaseInfo

ncRNA ID	novel_zma_miR12754
Species	Zea mays
Class	miRNA
Genome position	Chr7:122960749-122960812 [-]
Reference genome	RefGen_v4
Source	SRR5451003
Length	24
Mature sequence(if miRNA)	1 - AGGUUCUUUGUCGACUGUAUUGGC - 24
Stem-loop(if miRNA)	--  UA   C             AAG   U G   CA  GCA UCGGCAAAGAACC   ACC G G   ||  ||| |||||||||||||   ||| |   GU  UGU AGCUGUUUCUUGG   UGG C C CG  UA   C             AUA   C A
Stem-loop sequence	CAUAGCACUCGGCAAAGAACCAAGACCUGGGCACCGGUAUAGGUUCUUUGUCGACUGUAUUGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB167488.1	ncRNA:24   CGGUUAUGUCAGCUGUUUCUUGGA   1   |*||*||||*|||=|||||||||| targets:10   GACAUUACACUCGGCAAAGAACCU   33 Target Full Sequence	2.5	Sequence 5152 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239157.1	ncRNA:24   CGGUUAUGUCAGCUGUUUCUUGGA   1   |*||*||||*|||=|||||||||| targets:10   GACAUUACACUCGGCAAAGAACCU   33 Target Full Sequence	2.5	Sequence 5152 from Patent EP2985353	NA	coding protein	psRNATarget
HI407027.1	ncRNA:24   CGGUUAUGUCAGCUGUUUCUUGGA   1   |*||*||||*|||=|||||||||| targets:10   GACAUUACACUCGGCAAAGAACCU   33 Target Full Sequence	2.5	Sequence 5152 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238769.1	ncRNA:24   CGGUUAUGUCAGCUGUUUCUUGGA   1   |*||*||||*|||=|||||||||| targets:188   GACAUUACACUCGGCAAAGAACCU   211 Target Full Sequence	2.5	Sequence 4764 from Patent EP2985353	NA	coding protein	psRNATarget
JB167100.1	ncRNA:24   CGGUUAUGUCAGCUGUUUCUUGGA   1   |*||*||||*|||=|||||||||| targets:188   GACAUUACACUCGGCAAAGAACCU   211 Target Full Sequence	2.5	Sequence 4764 from Patent EP2559767	NA	coding protein	psRNATarget
HI406639.1	ncRNA:24   CGGUUAUGUCAGCUGUUUCUUGGA   1   |*||*||||*|||=|||||||||| targets:188   GACAUUACACUCGGCAAAGAACCU   211 Target Full Sequence	2.5	Sequence 4764 from Patent EP2074227	NA	coding protein	psRNATarget
HI409959.1	ncRNA:24   CGGUUAUGUCAGCUGUUUCUUGGA   1   *|=|=*=||*|||||||||||||| targets:85   CCUAGAGCACUCGACAAAGAACCU   108 Target Full Sequence	3.0	Sequence 8084 from Patent EP2074227	NA	coding protein	psRNATarget
LQ242089.1	ncRNA:24   CGGUUAUGUCAGCUGUUUCUUGGA   1   *|=|=*=||*|||||||||||||| targets:85   CCUAGAGCACUCGACAAAGAACCU   108 Target Full Sequence	3.0	Sequence 8084 from Patent EP2985353	NA	coding protein	psRNATarget
JB170420.1	ncRNA:24   CGGUUAUGUCAGCUGUUUCUUGGA   1   *|=|=*=||*|||||||||||||| targets:85   CCUAGAGCACUCGACAAAGAACCU   108 Target Full Sequence	3.0	Sequence 8084 from Patent EP2559767	NA	coding protein	psRNATarget