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BaseInfo

ncRNA ID	osa-miRf10872-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - UUUGGUACCAUGAGGUACCGGUA - NA
Stem-loop(if miRNA)	C           A    UA   -----AU  A UAUAACAAUAU CUUGAGGUACCGGUACCUCA GGUACCAAAUC UUUC  AUC       UG A           C |||||||||||||||||||| ||||||||||| ||||  |||       || |           C GAGCUCCAUGGCCAUGGAGU CCAUGGUUUAG AAAG  UAG       GA U           A                     A           C    GC   CAACCUA  - CGAUCCAUCCU
Stem-loop sequence	CUUGAGGUACCGGUACCUCACGGUACCAAAUCAUUUCUAAUCAUUGAAUAUAACAAUAUCCAUCCUACCUAGCUAGAUCCAACGAUCGGAAACGAUUUGGUACCAUGAGGUACCGGUACCUCGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015760380.1	ncRNA:23   AUGGCCAUGGAGUACCAUGGUUU   1   |||||||||||||*||||||||| targets:1034   UACCGGUACCUCACGGUACCAAA   1056 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group tropinone reductase homolog At5g06060 (LOC4326949), mRNA	tropinone reductase homolog At5g06060(LOC4326949)	coding protein	psRNATarget
HI404160.1	ncRNA:23   AUGGCCAUGGAGUACCAUGGUUU   1   |||=|||||||||*||||||||| targets:1   UACUGGUACCUCACGGUACCAAA   23 Target Full Sequence	1.5	Sequence 2285 from Patent EP2074227	NA	coding protein	psRNATarget
LQ236290.1	ncRNA:23   AUGGCCAUGGAGUACCAUGGUUU   1   |||=|||||||||*||||||||| targets:1   UACUGGUACCUCACGGUACCAAA   23 Target Full Sequence	1.5	Sequence 2285 from Patent EP2985353	NA	coding protein	psRNATarget
JB164621.1	ncRNA:23   AUGGCCAUGGAGUACCAUGGUUU   1   |||=|||||||||*||||||||| targets:1   UACUGGUACCUCACGGUACCAAA   23 Target Full Sequence	1.5	Sequence 2285 from Patent EP2559767	NA	coding protein	psRNATarget
JB164620.1	ncRNA:23   AUGGCCAUGGAGUACCAUGGUUU   1   |||=|||||||||*||||||||| targets:14   UACUGGUACCUCACGGUACCAAA   36 Target Full Sequence	1.5	Sequence 2284 from Patent EP2559767	NA	coding protein	psRNATarget
LQ236289.1	ncRNA:23   AUGGCCAUGGAGUACCAUGGUUU   1   |||=|||||||||*||||||||| targets:14   UACUGGUACCUCACGGUACCAAA   36 Target Full Sequence	1.5	Sequence 2284 from Patent EP2985353	NA	coding protein	psRNATarget
HI404159.1	ncRNA:23   AUGGCCAUGGAGUACCAUGGUUU   1   |||=|||||||||*||||||||| targets:14   UACUGGUACCUCACGGUACCAAA   36 Target Full Sequence	1.5	Sequence 2284 from Patent EP2074227	NA	coding protein	psRNATarget
XM_015786123.1	ncRNA:23   AUGGCCAUGGAGUACCAUGGUUU   1   |||||*|||||||*||||||||| targets:643   UACCGAUACCUCACGGUACCAAA   665 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4340617 (LOC4340617), mRNA	uncharacterized LOC4340617(LOC4340617)	coding protein	psRNATarget
AK287529.1	ncRNA:23   AUGGCCAUGGAGUACCAUGGUUU   1   |||||*|||||||*||||||||| targets:154   UACCGAUACCUCACGGUACCAAA   176 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
AK240791.1	ncRNA:23   AUGGCCAUGGAGUACCAUGGUUU   1   |||||*|||||||*||||||||| targets:154   UACCGAUACCUCACGGUACCAAA   176 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065001C03, full insert sequence	NA	coding protein	psRNATarget
AK120940.1	ncRNA:23   AUGGCCAUGGAGUACCAUGGUUU   1   *|*=||||=|||||||||||||| targets:1976   AAAUGGUAUCUCAUGGUACCAAA   1998 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J023037H21, full insert sequence	NA	coding protein	psRNATarget
XM_015758597.1	ncRNA:23   AUGGCCAUGGAGUACCAUGGUUU   1   ||==|*|||||||*||||||||| targets:863   UAUUGAUACCUCACGGUACCAAA   885 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable glutathione S-transferase GSTU6 (LOC4349191), mRNA	probable glutathione S-transferase GSTU6(LOC4349191)	coding protein	psRNATarget
AK059726.1	ncRNA:23   AUGGCCAUGGAGUACCAUGGUUU   1   ||==|*|||||||*||||||||| targets:866   UAUUGAUACCUCACGGUACCAAA   888 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:006-201-C07, full insert sequence	NA	coding protein	psRNATarget
AF402801.1	ncRNA:23   AUGGCCAUGGAGUACCAUGGUUU   1   ||==|*|||||||*||||||||| targets:882   UAUUGAUACCUCACGGUACCAAA   904 Target Full Sequence	2.5	Oryza sativa (japonica cultivar-group) clone S14053 putative glutathione S-transferase OsGSTU14 mRNA, complete cds	NA	coding protein	psRNATarget
AK288582.1	ncRNA:23   AU---GGCCAUGGAGUACCAUGGUUU   1   ||---==|||||=||||||||||*|| targets:2866   UAAAUUUGGUACUUCAUGGUACCUAA   2891 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090049I19, full insert sequence	NA	coding protein	psRNATarget